Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01751 ATGGAATCCTCCAAACAATTCCATAAATCGTTTAGGGAAGGTTTTACAGCTGGATATGCCTTTACTGCAACTTTTGTCATAATCATTTGTATGTCCTTATGGCTACCTGGATTGGCTGCACAACTTGTCAAGAACAGGAAAGCAAAACAGAAGCGTAAATTGGCACATCAGGAGTTGAAACTAGAAGAAAAAATCAAAGAGGCTAAACGAACGAGAGCCAGACGGATAAGACAAGAGCTACCTGTGGAGTTGCTAGATAGAAGAATACAGATCAATGAAATTGGATGGTTGACTTGTACAACGAGTTTCACAGAACTCTGTGATGCAACCGAACACTTCAGCAAGGACAGTGCCATTGGTTTGGGAAGGACAGGGACAGTGTACAAGGCAACAGATCCCAACGGTTGGTTGCTGGCAGTTAAGAGACTCTATGATTCTGAGTTGTTTATCAAAAGGTTCGATTTAGAAATAATGATGGGCAGGTACAGTCACAGAAACATAATGGCCCCCATCAGTTTCTGCATAGAAGAAGAAAAAAATGAAAGAATTTTGGTGTATCATTACATGTCAAATGGAAGACTTTCTGATTGGTTGAAAGATACCACCACATTAGGATGGCCTGCGGTTATTAGGATTGCATTAGGGGTTGCAAGAGGTTTATCTTGCCTTCATCATAGCTTGCACATGATTCATCTCGGTATTGGTCCCAAGAGTATCTTGTTGGGAAACAATTTTGAACCCAGAATATCCAATTTTGGAAGTGCCATAATCTTAAACTATGATCTAGGCAAAAAAATTGGATTTGATAAGAAGGATGTGTACGACTTTGGAACTTTGCTTTTTGAGCTGATTAGGGGGAAGACATTTGGTCAAACAAGTAAATATTTTAGCAATACTAATGGTCCTTTTGCAACTTACACATATGCTACTAGTCTATTCGAGGACCCTTTTGGCTTCTATGATGCCGTGGATAAATCTCTAAATGAGATAGAATTTGAAGATGAGGTTTCTGCTTTACTCAGAGTTGCATGTGACTGTGTTCATCCTTTTCCTCCTAAAAGGCCCACGATGCTTGAAGTATACAGCAAGATGAGCAACATATGGGAGAGAGATGGGATTTTTGAAGATTCTTCGGAGTCCTATTGTTTTGATTATGTTTCTACTACCATAAGTAGAGACGAATATGTCTAG 1191 0.3946 MESSKQFHKSFREGFTAGYAFTATFVIIICMSLWLPGLAAQLVKNRKAKQKRKLAHQELKLEEKIKEAKRTRARRIRQELPVELLDRRIQINEIGWLTCTTSFTELCDATEHFSKDSAIGLGRTGTVYKATDPNGWLLAVKRLYDSELFIKRFDLEIMMGRYSHRNIMAPISFCIEEEKNERILVYHYMSNGRLSDWLKDTTTLGWPAVIRIALGVARGLSCLHHSLHMIHLGIGPKSILLGNNFEPRISNFGSAIILNYDLGKKIGFDKKDVYDFGTLLFELIRGKTFGQTSKYFSNTNGPFATYTYATSLFEDPFGFYDAVDKSLNEIEFEDEVSALLRVACDCVHPFPPKRPTMLEVYSKMSNIWERDGIFEDSSESYCFDYVSTTISRDEYV 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01751 396 Coils Coil 47 74 - -
Pumo6g01751 396 SUPERFAMILY Protein kinase-like (PK-like) 97 362 IPR011009 -
Pumo6g01751 396 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 38 384 - -
Pumo6g01751 396 ProSiteProfiles Protein kinase domain profile. 113 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01751 396 Pfam Protein kinase domain 114 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01751 396 Gene3D Transferase(Phosphotransferase) domain 1 189 264 - -
Pumo6g01751 396 Gene3D Transferase(Phosphotransferase) domain 1 265 374 - -
Pumo6g01751 396 ProSitePatterns Protein kinases ATP-binding region signature. 119 141 IPR017441 GO:0005524
Pumo6g01751 396 Gene3D Phosphorylase Kinase; domain 1 81 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01751 Pumo-Chr6 26492369 26496911 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01751 105 367 Receptor kinase-like Gene Family AT5G07280 32.759 8.01e-35 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo6g01751 Pkinase 2.8e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01751 - - gmx:102663800 608.216