Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01750 ATGGGAATAATGTATGAGGGAAGGCTACCCAATGGTTGGAACCTTGCCGTTAAGAGACTATTCGATTCTAAACAATATCAGAGGCAGTTTCTTTTGGAAATAAGGATTTTGGGTAAGTACAGACACATAAATATAGTTCCCTTGCTTGGGTTCTGCGTAGAAAGAAATGAAAGGATTTTGGTATACCAATACATGTCAAATGGCAGGCTTTCAAAATGGTTACGTCCTTTAGAAAGTGAAGTTACATTGAAATGGCCTCTGAGGATCAAAATAGCACTTGGGGTGGCAAGAGGCTTATCCTGGCTCCATCATATATGCAATTTGCATGTTGTGCATCTTAATATAAGTTCGGAGTGTGTCTTGCTAGATAAGAATTTTGAACCCAAAATATCCAATTTTGGACAGGCCAAATTTATGAATCCCAACATTGAGGATGGTGCAAGCATGATATTTTATGTAAGCGATGGGAAGAAGGATGTCTATGACTTTGGTAGTTTGCTTTTTGAGCTAATCACAGGGAAAACATTTAAGGAGTTGTCGCGTTCATCCAATGCTAGTAACCTATCTGGCAACCCTTCTAATTTTTATAATGCAATTGAGGAATCTCTCATTGGGGAAGGTTTTGAAAATGAGTTCTACACTCTCATCAAAGTTGCATGTAAGTGTGTTGAACCTTTCCCAGATCAAAGGCCAACGATGCTTGAAGTTTATAACTATATGATCGATATATGGGGGGAGCAACACAATTTTAGTGATGATTTTGACGCACTCAACGTTTCTGTTTCTTCTACTAGTATAGACGAAATTGTTGAGCTATAA 819 0.381 MGIMYEGRLPNGWNLAVKRLFDSKQYQRQFLLEIRILGKYRHINIVPLLGFCVERNERILVYQYMSNGRLSKWLRPLESEVTLKWPLRIKIALGVARGLSWLHHICNLHVVHLNISSECVLLDKNFEPKISNFGQAKFMNPNIEDGASMIFYVSDGKKDVYDFGSLLFELITGKTFKELSRSSNASNLSGNPSNFYNAIEESLIGEGFENEFYTLIKVACKCVEPFPDQRPTMLEVYNYMIDIWGEQHNFSDDFDALNVSVSSTSIDEIVEL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01750 272 Gene3D Transferase(Phosphotransferase) domain 1 65 262 - -
Pumo6g01750 272 ProSiteProfiles Protein kinase domain profile. 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01750 272 PIRSF ILK 9 255 - -
Pumo6g01750 272 SUPERFAMILY Protein kinase-like (PK-like) 1 239 IPR011009 -
Pumo6g01750 272 Gene3D Phosphorylase Kinase; domain 1 1 64 - -
Pumo6g01750 272 Pfam Protein tyrosine and serine/threonine kinase 11 238 IPR001245 GO:0004672|GO:0006468
Pumo6g01750 272 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01750 Pumo-Chr6 26467166 26467984 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01750 2 254 Receptor kinase-like Gene Family AT1G69990 35.439 2.06e-49 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo6g01750 PK_Tyr_Ser-Thr 1.6e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01750 - - gmx:102664092 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01750 6 26467166 26467984 Pumo2g00970 2 14423061 14425707 PCT