Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01748 ATGTACAAGGCAACACTTCCCAACGGTTGGTTCCTGGCAGTTAAGAGACTCTATGATTCTGAGTTGTTTATCGAAAGGTTCGATTTAGAAATAATGATGGGCAGGTATAGTCACAGAAACATAATACCCCCAATCAGTTTCTGCATAGAAGAAGAAAAAAATGAAAGAATTTTGGTGTATCATTACATGTCAAATGGAAGAGTTTCCGATTGGTTGAATGATACCACCACATTAGGATGGCCTGCAGTTATAAGGATCGCATTAGGTGTTGCAAGAGGTTTATCTTGCCTTCATCATAGCATGCATATGGTTCATCTCAGTATTGGCCCCGAGAGTATCTTGTTAGGAAACAATTTTGAGCCCAGAATATCCAATTTTGGAAGTGCCATGTTCATAAACTATGATCTAGGCAAAAACATTGGATTTGAGAAGAAGGATGTGTACGACTTTGGAACTTTGCTATTTCAGGTTATTAGGGGGAAGACATTTGGCCAAACGAGTAAATGTTTTAGCAATACTAAAGGTCCTTTTGCAACTTACACATATGCTACTAATATGTTCGAGGACCCTTTTGGCTTCTATGATGCCGTGGATAAATCTCTAAATGAGATAGATTTTGAAGATGAGGTTTCTGCTTTACTCAGAGTTGCATGTGACTGTGTTCATCCTTTTCCTCCTAAAAGGCCCACGATGCTTGAAGTGTACAGCAAGATAAGCAACATATGGGAGAGAGATGGGATTTTTGAAGATTCTTTGATGTCCTAG 765 0.3895 MYKATLPNGWFLAVKRLYDSELFIERFDLEIMMGRYSHRNIIPPISFCIEEEKNERILVYHYMSNGRVSDWLNDTTTLGWPAVIRIALGVARGLSCLHHSMHMVHLSIGPESILLGNNFEPRISNFGSAMFINYDLGKNIGFEKKDVYDFGTLLFQVIRGKTFGQTSKCFSNTKGPFATYTYATNMFEDPFGFYDAVDKSLNEIDFEDEVSALLRVACDCVHPFPPKRPTMLEVYSKISNIWERDGIFEDSLMS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01748 254 ProSiteProfiles Protein kinase domain profile. 1 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01748 254 Pfam Protein kinase domain 31 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01748 254 Gene3D Phosphorylase Kinase; domain 1 1 62 - -
Pumo6g01748 254 Gene3D Transferase(Phosphotransferase) domain 1 63 138 - -
Pumo6g01748 254 Gene3D Transferase(Phosphotransferase) domain 1 139 247 - -
Pumo6g01748 254 SUPERFAMILY Protein kinase-like (PK-like) 2 236 IPR011009 -
Pumo6g01748 254 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01748 Pumo-Chr6 26448221 26448985 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01748 2 249 Receptor kinase-like Gene Family AT1G27190 30.325 1.08e-34 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo6g01748 Pkinase 2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01748 - - gmx:102663800 473.781