Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01746 ATGAAGTCCACAATGAGGTTCAACGAAATCAAAGATGCAACTGATTGCTTTTCTATTGATAATGCCATTGGGATGGGAAAAATTGGAATAATGTACGAGGGAAGGTTGCCCAATGGTTGGAACCTTGCCGTTAAGAGACTATTCGATTCTAAACAATCTAAGAGGCAATTTCTTTTAGAAATAAGAATTTTGGGCAAGTACAGATACAAAAATATAGTTCCCTTGCTTGGATTCTGCGTGGAAGGAAAGGAGAGGATTCTGGTATACCAATTCATGTCAAATGGAAGGCTTTCAAAATGGTTGCGTCCTCTACAAAGTGAAGTTAGATTGAAATGGCCTCAAAGGATCAAAATAGCACTTGGGGTAGCAAGAGGCTTATTCTGGCTCCATCATATATGTGATTTGCATGTTGTGCATCTTAATATAAGTTCAGAGTGTGTCTTGCTAGTTAAGAATTTTGAACCCAAAATATCCAATTTTGGAAAGGCCAAGTTTATGAATCCCAACATTGAGGACGGTGCAAGCATGATATTTTATGTAAGTGATGGGAAGAAGGATGTGTATGACTTTGGTAGTTTGCTTTTTGAGCTAATCACAGAGAAAACATTTAAGGAGTTGTCGGCTTCATCCAATACTACTAACCTATCTGGTAGCCCTTCAATTTTTTATAATGCAATGGATGAATCTCTCATTGGGGAAGGTTTTGAAAATGAGGTCTACACTCTCATCAAAATTGCATGTAAGTGTGTTAAGCCTTTCCCGGATGAAAGGCCAACAATGCTTGAAGTTTATAACTATATGATTGATATATGGGGGGGACGACATAGAGTTAGTGATGATTCTGATGCACTATATGTACCTATTTCTTCTACTAGTACTAGTATAGACGAAGTTGTTGAGCTATAA 906 0.3753 MKSTMRFNEIKDATDCFSIDNAIGMGKIGIMYEGRLPNGWNLAVKRLFDSKQSKRQFLLEIRILGKYRYKNIVPLLGFCVEGKERILVYQFMSNGRLSKWLRPLQSEVRLKWPQRIKIALGVARGLFWLHHICDLHVVHLNISSECVLLVKNFEPKISNFGKAKFMNPNIEDGASMIFYVSDGKKDVYDFGSLLFELITEKTFKELSASSNTTNLSGSPSIFYNAMDESLIGEGFENEVYTLIKIACKCVKPFPDERPTMLEVYNYMIDIWGGRHRVSDDSDALYVPISSTSTSIDEVVEL 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01746 301 ProSiteProfiles Protein kinase domain profile. 17 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01746 301 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 5 270 - -
Pumo6g01746 301 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Pumo6g01746 301 Pfam Protein tyrosine and serine/threonine kinase 19 265 IPR001245 GO:0004672|GO:0006468
Pumo6g01746 301 Gene3D Transferase(Phosphotransferase) domain 1 92 279 - -
Pumo6g01746 301 SUPERFAMILY Protein kinase-like (PK-like) 5 266 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01746 Pumo-Chr6 26438971 26439876 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01746 5 282 Receptor kinase-like Gene Family AT1G27190 34.754 4.48e-47 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Pumo6g01746 PK_Tyr_Ser-Thr 5.8e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01746 - - gmx:102664092 525.783