Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01725 ATGGAGAACTACCAGTTCCCGGCGTCGTACCCGGACTCCGGCGACTCGTCGCCGCGGTCGAGGGAGATCGACTTCGAGAACCCGCCGCCATGGGACGAGCAGCAGAGCCAGAACTTCAAGGCCAAGTTCATGTGCAGCTACGGCGGCAAGATCCAGCCACGAACCCACGACAACCAGCTCTCCTACGTCGGCGGCGACACCAAGATCCTCGCCGTGGACCGCTCCATCAAGTTCCCCACCTTCCTCTCCAAGCTCGCCGCCCTCTGCGACGCCGCGCCGCAGGACCTCACCTTCAAGTACCAGCTCCCCGGTGAGGACCTCGACGCCCTCATCTCCGTCACCAACGACGACGACCTCGAACACATGATGCACGAGTACGACAGACTCTATCGCCCTAACTCAAAACCCGTCAGAATGAGACTCTTCCTCTTCACGCTTTCCGATTCGAATACAAACCCTAATTCCTCTTTCTCCACCGAACGCGACCGTTTTGTTGAGGCTCTTAATTCGGGTCCTATTGCTCCTCAATCCGACCCGGTCAAAACCCCACCCGTTACTCCCACTAATGTTGATTATCTTTTTGGTTTGGACAAGGCCGTTGCTCCTCCCACGCTTCCTCCTTCTTTCGTTGCCGCGAAGTTCCACGATCCCGTGCCGGAGCCAGTCGCACCGCAGCCGGAGTATCAATCTCGCGGCGGAGTTTCCGATCGGGTTGTCGGATCGGATCCGAATGTGAATCCGATTGAGATTCAGAGACAGTTGCAGCAGGAGATGCAGCGTTTGCAGATTGCGGAGAATGAATATCAGTTGCAGCAGGAGATGCAGCGTTTGCAGATTGCGGAGAATGAATATCGTCGGAGGAGTGAGGATGGATTCGCCGGTGGTTATGCTGCTGCAGCCGGAGGGGATTATTACATGCAGAAGGTGCCGGAGAAGCTTCCGCCTCAGAATGCGCCTCCGGCGCATTCGGCGGCCTACTGGCCGGAGAAGCAGTTTTCCGGCGAGGGTTATCAGACGACGGTGACGACGGCTCCCGGAGGAGGTGATCAGCCGGTGTATGTCATCCAGGCGCCGGGGACGTTCTACCACGCGCCGGTGGTGCGGCCTCAGGCGGCGGCGCAGGGGTACTACGCCGTGCAGAGGATGAGTTCCGAGGGTTACCGCGAGCAGGCGGTGTACGGCGGCGTGGCGCAGCAGAAGACGGCGTTTTCGTCTGCGGGCCCGGCGCAGCCGGTTAAGGGTCCTGCGTATGGGGAGGGATATGGCGGCGTGGTGAGGCCTGCGGGGGTGCCGGATAACGCGGCGTACGCGCAGGTGGCGTATGATAGTGCGAGTGGGAGACAGGTTTACTATACTGCGCAGGGAGGGGTGGTACACGCGCCGCCGCAGTACCAAGGGGTTCCGCCGGTGGATGCGAGGTCGGTTGGGGTTTCGGTGGGACAGGATGTTAAGGTGGTTAACAAGACCTCCCAAGGTTCTGTGTGA 1485 0.6007 MENYQFPASYPDSGDSSPRSREIDFENPPPWDEQQSQNFKAKFMCSYGGKIQPRTHDNQLSYVGGDTKILAVDRSIKFPTFLSKLAALCDAAPQDLTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRPNSKPVRMRLFLFTLSDSNTNPNSSFSTERDRFVEALNSGPIAPQSDPVKTPPVTPTNVDYLFGLDKAVAPPTLPPSFVAAKFHDPVPEPVAPQPEYQSRGGVSDRVVGSDPNVNPIEIQRQLQQEMQRLQIAENEYQLQQEMQRLQIAENEYRRRSEDGFAGGYAAAAGGDYYMQKVPEKLPPQNAPPAHSAAYWPEKQFSGEGYQTTVTTAPGGGDQPVYVIQAPGTFYHAPVVRPQAAAQGYYAVQRMSSEGYREQAVYGGVAQQKTAFSSAGPAQPVKGPAYGEGYGGVVRPAGVPDNAAYAQVAYDSASGRQVYYTAQGGVVHAPPQYQGVPPVDARSVGVSVGQDVKVVNKTSQGSV 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01725 494 SUPERFAMILY CAD & PB1 domains 56 151 - -
Pumo6g01725 494 Coils Coil 251 290 - -
Pumo6g01725 494 SMART PB1_new 55 146 IPR000270 GO:0005515
Pumo6g01725 494 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 60 146 - -
Pumo6g01725 494 MobiDBLite consensus disorder prediction 1 16 - -
Pumo6g01725 494 MobiDBLite consensus disorder prediction 1 34 - -
Pumo6g01725 494 Pfam PB1 domain 56 144 IPR000270 GO:0005515
Pumo6g01725 494 CDD PB1_UP2 44 144 - -
Pumo6g01725 494 PANTHER OS05G0427100 PROTEIN-RELATED 10 373 - -
Pumo6g01725 494 Gene3D - 61 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01725 Pumo-Chr6 25992095 25993926 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01725 40 170 MAP Kinase Kinase Kinase AT5G57610 43.478 1.60e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01725 - - gmx:100810467 778.089