Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01709 ATGAGCACTGCCACTATGTTGGAGTCTTTAGCTTGGTGCCAAAGCTTTAAGGGATATGACCTTACCAAGCAAAAGAGTCCGGGTTACTCTCATGCTATTTCACGAGTTTATAGAAATTCTATTTTCATGCTTTATTCAGTTAACAAGCAAGTGCCACTACTACCACATGGTGCTAGTCATGGGATATTTCACAGGAGTTCTGTGTCAGAAAATTTCTTTAAAGGGTATCCTCTCAATGTTCCATCATGGAAAGGATTGTATAGGCCACGTTGGGAACGGCTACAAACAAATGTAGCATATGATGTTGCTGGTGCTGTTGAAGTCATCAATGATTTAGGATTGGATACTCTTACTTTCTTGGCTGTGACCGTCGTAATTGTGCCTACATTCAAGTCACTTAAAGCCAGTCCTATACTTGGTTTCTTCTGTGCTGGTGTGGTACTCAATCAGTTTGGTTTAATTAGAAACCTTACAGATGTTAAAGTTTTATCCGAATGGGGGATCCTTTTCTTGCTGTTTGAGATGGGTTTAGAGCTTTCACTTGCACGTCTGAAAGCTCTTGCAAAATATGCTTTTGGGATGGGATTGGCTCAGGTTGTACTGTCTACTTTAGCATTTACTGCTTTTGAACTTCCTCCAAATGGAGCTGTTGGAACAAAAATTTTGGAATTCCTTTTCCACTCTAGGCCTGATCTGGTGAACATCAGAAGTGTTGATGAAGCTGTAGTGATTGGTGCTGCTCTCTCTCTGTCATCTTCTGCATTTGTTCTACAGCTTCTTGCAGAGAAAGGTGAGCTTCCTACAAGATTTGGTTCAGCAACTCTTGGAATACTTCTTTTGCAGGACTTGGCCGTTGTCCCTCTTTTAGTCATACTTCCAATACTAGAGAGCCAGAATATAACTGAGGGAAGTATTTGGCCCATGCTTGCTCAAGAAAGTTTAAAGGCATTAGGTGGATTGGGTCTGCTTTCTCTTGGGGCAAAGTACATTCTCAGAAGAGTTTTTGAGGTTGTTGCAGATACAAGGAGCTCAGAGGCTTTTGTTGCTCTTTGCTTGCTAACTATTGCTGGGACTTCACTAGTCACACAGAATTTGGGCTTTAGTGACACGCTCGGGGCTTTTTTAGCTGGGGCAATTTTAGCAGAGACAAACTTCAGGACCCAGATTGAAGCTGACATAAGACCATTTAGAGGCTTGCTGCTTGGGTTGTTTTTTCTAACTACGGGAACTTCAATTGACATGCAGCTCCTTTTGCGAGAGTGGCCAAATGTACTTTCACTCTTGGGAGGTTTAATTGTTATAAAGACATTGATCATAACTGCAATTGGTCCTCGTGTTGGGCTTACTTTGCAAGAAAGTGTAAGAATAGGATTGCTTCTATCCCAAGGAGGCGAGTTTGGATTTGTTGTTTTCTCTTTAGCAAATAGGCTTGGGGTGCTTCCTCTTGAGCTCAACAAGCTGCTCATAATTGTTGTTGTATTGTCAATGGCATTAACCCCATTTCTGAATGAAGCTGGAAGAAGGGCTGCTAGTTTTATTGAAGAAAAATCTGATGCTGAGAATAAACAGAAAGCTTCTGAGATGGTTAACTTCAACTTTAGCGAACCTGTTGTTATCCTTGGATTTGGACAAATGGGCCAGGCAGCTAGAAAAATTGGCTTTCCTGTACTCTATGGGGATGGATCACGTCCAGATGTTCTCCACTCTGCTGGTGTTGCTTCTCCAAAAGCTTTTATGATTATGTACACTGGGAAGAAGAAGACAATTGAAGCTGTTCAGAGGCTAAGATTGAATTTTCCTAGAATCCCAATCTATGCCAGAGCTCGAGATCTCAAGCATCTTTTAGATCTGAAGAAAGCGGGTGCAACGGATGCCATTTTGGAAAATGCAGAGACTAGCTTGCACCTGGGTTCTAAGCTGCTGAAAGGCCTTGGTGTGATGTCTGATGATGTAGCATTTTTGAGTCAGCTTATTAGAGATTCCATGGAGCTCCAAGCGCAAGAAGCAATCGGCCAATCTGAAGATCGTGGATTAGATATTATGAAACCGCTGCAGGTACTTCAGAACAATGATTTGGCTCAGGTGAAAGTTGCTGACACGAGGGAAGCACGTGTACCGGCGGCAACAACTTCACCAGAATCTGAATTATCAGAAATGAATCAGAAAGATCAAGCTTCTTCGGTTAGAAATCAAAGGGAAGTAGATCCAGAAGAACAAGATCATGAACTAAATGAAGCTGTGAATTTAGAAGGAAATGGTGTTTTAGTTAGCTCACAAAGTAGTGAAGAAAGCTCAATGGTTGTAGACCCATCAAACCCTTCTTCCCATACTGCCACTGAGGAACCCTGA 2349 0.4206 MSTATMLESLAWCQSFKGYDLTKQKSPGYSHAISRVYRNSIFMLYSVNKQVPLLPHGASHGIFHRSSVSENFFKGYPLNVPSWKGLYRPRWERLQTNVAYDVAGAVEVINDLGLDTLTFLAVTVVIVPTFKSLKASPILGFFCAGVVLNQFGLIRNLTDVKVLSEWGILFLLFEMGLELSLARLKALAKYAFGMGLAQVVLSTLAFTAFELPPNGAVGTKILEFLFHSRPDLVNIRSVDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDLAVVPLLVILPILESQNITEGSIWPMLAQESLKALGGLGLLSLGAKYILRRVFEVVADTRSSEAFVALCLLTIAGTSLVTQNLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDMQLLLREWPNVLSLLGGLIVIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAASFIEEKSDAENKQKASEMVNFNFSEPVVILGFGQMGQAARKIGFPVLYGDGSRPDVLHSAGVASPKAFMIMYTGKKKTIEAVQRLRLNFPRIPIYARARDLKHLLDLKKAGATDAILENAETSLHLGSKLLKGLGVMSDDVAFLSQLIRDSMELQAQEAIGQSEDRGLDIMKPLQVLQNNDLAQVKVADTREARVPAATTSPESELSEMNQKDQASSVRNQREVDPEEQDHELNEAVNLEGNGVLVSSQSSEESSMVVDPSNPSSHTATEEP 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01709 782 MobiDBLite consensus disorder prediction 710 727 - -
Pumo6g01709 782 FunFam Glutathione-regulated potassium-efflux system protein KefB 547 672 - -
Pumo6g01709 782 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 99 548 - -
Pumo6g01709 782 MobiDBLite consensus disorder prediction 703 782 - -
Pumo6g01709 782 Coils Coil 502 522 - -
Pumo6g01709 782 Gene3D - 111 511 IPR038770 -
Pumo6g01709 782 Pfam Sodium/hydrogen exchanger family 118 503 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pumo6g01709 782 MobiDBLite consensus disorder prediction 728 745 - -
Pumo6g01709 782 ProSiteProfiles RCK N-terminal domain profile. 467 634 IPR003148 GO:0006813
Pumo6g01709 782 FunFam K(+) efflux antiporter 3, chloroplastic 111 510 - -
Pumo6g01709 782 MobiDBLite consensus disorder prediction 751 782 - -
Pumo6g01709 782 Gene3D - 537 671 - -
Pumo6g01709 782 Pfam TrkA-N domain 547 626 IPR003148 GO:0006813
Pumo6g01709 782 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 536 640 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01709 Pumo-Chr6 25782495 25793191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01709 1 744 Inorganic Solute Cotransporters AT4G04850 67.092 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01709 K03455 - gmx:100798214 1348.18