Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01705 ATGGAGAACTACCAGTTCCCGGCGTCGTACCCGGACTCCGGCGACTCGTCGCCGCGGTCGAGGGAGATCGACTTCGAGAACCCGCCGCCATGGGACGAGCAGCAGAGCCAGAACTTCAAGGCCAAGTTCATGTGCAGCTACGGCGGCAAGATCCAGCCACGAACCCACGACAACCAGCTCTCCTACGTCGGCGGCGACACCAAGATCCTCGCCGTCGACCGCTCCATCAAGTTCCCCACCTTCCTCTCCAAGCTCGCCGCCCTCTGCGACGCCGCGCCGCAGGACCTCACCTTCAAGTACCAGCTCCCCGGTGAGGACCTGGACGCCCTCATCTCCGTCACCAACGACGACGACCTCGAACACATGATGCACGAGTACGACAGACTCTATCGCCCTAACTCAAAACCCGTCAGAATGAGACTCTTCCTCTTCACGCTTTCCGATTCGAATACAAACCCTAATTCCTCTTTCTCCACCGAACGCGACCGTTTTGTTGAGGCTCTTAATTCGGGTCCTATTGCTCCTCAATCCGACCCGGTCAAAACCCCACCCGTTACTCCCACTAATGTTGATTATCTTTTTGGTTTGGACAAGGCCGTTGCTCCTCCCACGCTTCCTCCTTCTTTCGTTGCCGCGAAGTTCCACGATCCCGTGCCGGAGCCAGTCGCACCGCAGCCGGAGTATCAATCTCGCGGCGGAGTTTCCGATCGGGTTGTCGGATCGGATCCGAATGTGAATCCGATTGAGATTCAGAGACAGTTGCAGCAGGAGATGCAGCGTTTGCAGATTGCGGAGAATGAATATCAGTTGCAGCAGGAGATGCAGCGTTTGCAGATTGCGGAGAATGAATATCGTCGGAGGAGTGAGGATGGATTCGCCGGTGGTTATGCTGCTGCAGCCGGAGGGGATTATTACATGCAGAAGGTGCCGGAGAAGCTTCCGCCTCAGAATGCGCCGCCGGCGCATTCGGCGGCCTACTGGCCGGAGAAGCAGTTTTCCGGCGAGGGTTATCAGACGACGGTGACGACGGCTCCCGGAGGAGGTGATCAGCCGGTGTATGTCATCCAGGCGCCGGGGACGTTCTACCACGCGCCGGTGGTGCGGCCTCAGGCGGCGGCGCAGGGGTACTACGCCGTGCAGAGGATGAGTTCCGAGGGTTACCGCGAGCAGGCGGTGTACGGCGGCGTGGCGCAGCAGAAGACGGCGTTTTCGTCGGCGGGGCCGGCGCAGCCTGTTAAGGGTCCTGCGTATGGGGAGGGATATGGCGGCGTGGTGAGGCCTGCGGGGGTGCCAGATAACGCGGCGTACGCGCAGGTGGCGTATGATAGTGCGAGTGGGAGACAGGTTTACTATACTGCGCAGGGAGGGGTGGTGCACGCGCCGCCGCAGTACCAAGGGGTTCCGCCGGTGGATGCGAGGTCGGTTGGGGTTTCGGTGGGACAGGATGTTAAGGTGGTTAACAAGACCTCCCAAGGTTCTGTGTGA 1485 0.6013 MENYQFPASYPDSGDSSPRSREIDFENPPPWDEQQSQNFKAKFMCSYGGKIQPRTHDNQLSYVGGDTKILAVDRSIKFPTFLSKLAALCDAAPQDLTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRPNSKPVRMRLFLFTLSDSNTNPNSSFSTERDRFVEALNSGPIAPQSDPVKTPPVTPTNVDYLFGLDKAVAPPTLPPSFVAAKFHDPVPEPVAPQPEYQSRGGVSDRVVGSDPNVNPIEIQRQLQQEMQRLQIAENEYQLQQEMQRLQIAENEYRRRSEDGFAGGYAAAAGGDYYMQKVPEKLPPQNAPPAHSAAYWPEKQFSGEGYQTTVTTAPGGGDQPVYVIQAPGTFYHAPVVRPQAAAQGYYAVQRMSSEGYREQAVYGGVAQQKTAFSSAGPAQPVKGPAYGEGYGGVVRPAGVPDNAAYAQVAYDSASGRQVYYTAQGGVVHAPPQYQGVPPVDARSVGVSVGQDVKVVNKTSQGSV 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01705 494 SUPERFAMILY CAD & PB1 domains 56 151 - -
Pumo6g01705 494 Coils Coil 251 290 - -
Pumo6g01705 494 SMART PB1_new 55 146 IPR000270 GO:0005515
Pumo6g01705 494 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 60 146 - -
Pumo6g01705 494 MobiDBLite consensus disorder prediction 1 16 - -
Pumo6g01705 494 MobiDBLite consensus disorder prediction 1 34 - -
Pumo6g01705 494 Pfam PB1 domain 56 144 IPR000270 GO:0005515
Pumo6g01705 494 CDD PB1_UP2 44 144 - -
Pumo6g01705 494 PANTHER OS05G0427100 PROTEIN-RELATED 10 373 - -
Pumo6g01705 494 Gene3D - 61 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01705 Pumo-Chr6 25747017 25748848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01705 40 170 MAP Kinase Kinase Kinase AT5G57610 43.478 1.60e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01705 - - gmx:100810467 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01705 6 25747017 25748848 Pumo2g00996 2 15033899 15035627 PCT