Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01696 ATGGAGGAGGCCTTGGCCTTGGTCGTGTGGATAACCAAACACTTCTCCCAACTGAGCATCAATTTATGGCAGTCGAGTTTGACAATCTCTCAAATCAGAGTTCTTATGGTGATGGTTTGGCATTCTTCCTTGCAAGCACAAATCTCCCAAGTGCAAATGACGCTTTCTCAAATCACCCAACCGAGCATCAATCTGCGGAAGAGGAGTTTCTCAAATCACCCAAACGTGAATGATACATCAGAACTAAAAGGAGGTGACCTTGGTCCTGGTCATGTGGATAACCAAACCCTACCCTCTAATGCCGATCATACGAAGAAAAGCAAGTTCATCAACAGAAAATTATTGGGGGGAATAGGAATTGGTTTAGGTTTGTCCGTGACTTTATTTGGGTTGGTCTATGTTTTATTAAGGAAGATGAATAAAAGGAAAGAAGAAGAAGCCACTTCAGAAACCGCTTCTGATTTGAAGATGGATGATGAGTTCCAATTGGGCAATGGACCTAAGAAGATCAGCTATGAGGAGTTGATATGTGCAACAAACAACTTTGAAGTGACACAGAAGCTGGGGCAAGGTGGTTTTGGTTGTGTTTATAAAGGTTATTTCAAAGACTTAAACTCATATGCTGCTATAAAGAGGATATCAGCAGGTTCAGCACAAGGTGTAAAGGAATACGCAGCAGAAGTGAGGATCATTAGCCAGTTGAGGCACAGGAATTTGGTGAAACTCTCCGGTTGGTGCCACAGGAAGAATGATCTCTTTCTGATATACGAGTACATGCCAAATGGCAGCTTAGATTCTCATCTTTTTCGTGGAGAAAGTATCTTGTCGTGGCATGTAAGGTACAACATAGCTCTGGGCTTGGCCTCAGCATTGTTTTACCTACAAGAAGAATGGGAAAAATGTGTGCTTCACAGGGACATCAAATCAAGCAACATATTGTTGGACTCCCACTTCAACGCTAAGCTTGGAGATTTTGGCCTAGCTAGAATTGCGGATCATGAGAAAGGATCACATACCACGGTTGTGGCTGGAACCATAGGTTACCTAGACCCTGAATATGTGAAAACTGGCAGGGCTAGAAAGGAATCTGACATTTTCAGTTTTGGAGTTGTTTTGTTGGAGGTGGCCAGTGGAAGAAAAGCCATTTTTCACCATAAAGAGAAAAAGGGTCAAGTATCATTAATTGAGTGGGTGTGGGAGCTCCATAGATTTAGAAATGTCCTTGCAGCAGCAGATCTAAACCTAAATGGGGAATTTGATGTGCAGCAAATGGAATGCTTACTGATTGTTGGTCTCTGGTGTGCTAATCCAGATTGCAAATCCAGGCCTACTATAAGGCAAGTGATTAAGGTGCTTAACTTGGAAGCTCCATTACCAATTCTCCCACTAAAGATCCCTGTACTAGACTACAACCCTCCAACAACAAATGAGTTTTTTTTCTCAGTTTCATCTTCCTTTCAGGATGCAAGTTAA 1473 0.4223 MEEALALVVWITKHFSQLSINLWQSSLTISQIRVLMVMVWHSSLQAQISQVQMTLSQITQPSINLRKRSFSNHPNVNDTSELKGGDLGPGHVDNQTLPSNADHTKKSKFINRKLLGGIGIGLGLSVTLFGLVYVLLRKMNKRKEEEATSETASDLKMDDEFQLGNGPKKISYEELICATNNFEVTQKLGQGGFGCVYKGYFKDLNSYAAIKRISAGSAQGVKEYAAEVRIISQLRHRNLVKLSGWCHRKNDLFLIYEYMPNGSLDSHLFRGESILSWHVRYNIALGLASALFYLQEEWEKCVLHRDIKSSNILLDSHFNAKLGDFGLARIADHEKGSHTTVVAGTIGYLDPEYVKTGRARKESDIFSFGVVLLEVASGRKAIFHHKEKKGQVSLIEWVWELHRFRNVLAAADLNLNGEFDVQQMECLLIVGLWCANPDCKSRPTIRQVIKVLNLEAPLPILPLKIPVLDYNPPTTNEFFFSVSSSFQDAS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01696 490 ProSiteProfiles Protein kinase domain profile. 182 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01696 490 SMART serkin_6 182 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01696 490 CDD STKc_IRAK 188 453 - -
Pumo6g01696 490 Gene3D Transferase(Phosphotransferase) domain 1 259 470 - -
Pumo6g01696 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 302 314 IPR008271 GO:0004672|GO:0006468
Pumo6g01696 490 FunFam L-type lectin-domain containing receptor kinase IX.1 167 258 - -
Pumo6g01696 490 SUPERFAMILY Protein kinase-like (PK-like) 167 471 IPR011009 -
Pumo6g01696 490 MobiDBLite consensus disorder prediction 69 102 - -
Pumo6g01696 490 Gene3D Phosphorylase Kinase; domain 1 167 258 - -
Pumo6g01696 490 FunFam Lectin-domain containing receptor kinase A4.3 259 472 - -
Pumo6g01696 490 ProSitePatterns Protein kinases ATP-binding region signature. 188 211 IPR017441 GO:0005524
Pumo6g01696 490 PANTHER - 51 456 - -
Pumo6g01696 490 Pfam Protein kinase domain 182 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01696 Pumo-Chr6 25492160 25493632 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01696 105 471 Receptor kinase-like Gene Family AT5G10530 52.830 9.98e-137 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pumo6g01696 Pkinase 8.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01696 - - lja:Lj4g3v0408370.1 556.599