Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01695 ATGGTCTCAGCAGCACCAAAAGCAATTTTTGATCCTAATGACAAGAGCATAATATATGAGGGATCAGCAAACCCTGTAGCGCCAACTATCCAACTCACAAGAAACCAAGCGGACAAAGGCATGATTGGAAGCATAGGTCGAGCCACGTATTACCAACCTATGCACCTGTGGGACAAAGCCTCAGGGAACCTCACAGATTTCACAACCCATTTTTCTTTTGTCATAGATTCACAGAACCGAAGTAAATATGGAGATGGGATTGCATTCTTCCTTGCCCCTGCTGGTTCAAAGATTCCTAATGCCACAAAAGGAGGTTCTATGGGTCTGACACTTGATAACCAGCGATTGAACTCCACAGACAATCCATTTGTTGCTGTGGAGTTTGATATCTATCAGAATGGCTGGGATCCACCACATGAACATGTTGGAATCGACATCAACTCTATGAGATCTGTTGCTAATGTAACATGGTTGGCTGATATCAGGGAAGGGAAACTCAATGAGGTTTGGATCAGTTACAATTCTAGTTCATTAAATTTGAGTGTCGTGTTCACAGGTTTTAGCAATGATACCAATCATACCATTCAGCAGCAACATCTATCTGCCATAGTTGATCTGAGACTTTATTTACCAGAATTGGTTACTTTTGGCTTCTCAGCTGCCACGGGAAATGCAACTGCTATACATAGTCTCAACTCATGGGATTTTAGCTCAACTTTGGCAGCAAAGGAAAACATAACAAAGGGAGCAGACCCAGTCGCAAGGTCTCCAACCTCCAATATAGCTCCCAGTCAGAAGAAAAAGAACAAGACAGGCTTGGTAGTGGGATTGAGTATTGGTGGATTTGTTTTGATTTGTGGGTTGGGTTTGATTTCAATTGGCTTGTGGAAGAAGTGGAAGAAAGGAAGTGATCAAGAGGAAGATCATGATTTTGAAGAGTATATGGGTGAAGATTTTGGAAGAGGGGCAGGACCCAGAAAGTATTCTTATGCTGAATTAGCACAATCAGCTAATGGTTTCAAAGATGAGCACAAGCTAGGACAGGGAGGTTTTGGAGGTGTTTATAGGGGTTATCTTAAAGACATAAAGTCTCATGTTGCTATCAAGAGGGTGTCAGAAGATTCTGATCAAGGGATAAAGGAGTTTGCATCAGAAGTAAGAACTATTAGCCGGTTAAGGCATCGAAATCTAGTGCATTTGATTGGTTGGTGTCATGAAAGGAAAAAGCTCTTGCTTGTATATGAGTACATGCCAAATGGAAGCTTGGATATTCATCTTTTCAAGAAGCAAAGCTTGCTGAAATGGGCAGTGAGATATAACATAGCTCGGGGATTGGCCTCTGCATTGCTATACTTGCACGAGGAATGGGAACAATGTGTTGTGCATAGAGACATAAAGTCAAGCAACATTATGCTGGATTCAGAGTTTAATGCCAAACTTGGGGATTTTGGTTTAGCAAGGTTTGTGGACCATGCAAAAGGAGCACAAACTACAGCTTTAGCTGGCACTATGGGCTACATGGCTCCTGAATGTGCTACCTCGGGCAGGGCTAGTAAGGAATCAGATGTGTACAGTTTTGGAGTTGTTGCTTTAGAGATAGCTTGTGGAAGAAAACCCATAAAGTATAAGGCTCTAGAAAATGAAATAAATATTGTGGAGTGGGTGTGGGGACTCTATGGAGAAGAGAGAATTGTTGAAGCAGCAGATCCAAGACTAGAAGGGGATTTTGAGGAGGAGCAAATAAAATGCTTGATGATTGTTGGTCTTTGGTGTGCTCACCCTGACCATAATAATAGGCCTTCAATTAGGCAAGCAATTCAAGTGCTTAACTTTGAAGCTCCCTTGCCCAATCTTCCATCAAGTTTGCCTGTTCCAACATATCTTGAAGGCCCCCTGCACTCATCCATAGCACCATTCAGCATAACTGCTTCAGAGGAATGGTCAAACCCAGATCACTAA 1959 0.4232 MVSAAPKAIFDPNDKSIIYEGSANPVAPTIQLTRNQADKGMIGSIGRATYYQPMHLWDKASGNLTDFTTHFSFVIDSQNRSKYGDGIAFFLAPAGSKIPNATKGGSMGLTLDNQRLNSTDNPFVAVEFDIYQNGWDPPHEHVGIDINSMRSVANVTWLADIREGKLNEVWISYNSSSLNLSVVFTGFSNDTNHTIQQQHLSAIVDLRLYLPELVTFGFSAATGNATAIHSLNSWDFSSTLAAKENITKGADPVARSPTSNIAPSQKKKNKTGLVVGLSIGGFVLICGLGLISIGLWKKWKKGSDQEEDHDFEEYMGEDFGRGAGPRKYSYAELAQSANGFKDEHKLGQGGFGGVYRGYLKDIKSHVAIKRVSEDSDQGIKEFASEVRTISRLRHRNLVHLIGWCHERKKLLLVYEYMPNGSLDIHLFKKQSLLKWAVRYNIARGLASALLYLHEEWEQCVVHRDIKSSNIMLDSEFNAKLGDFGLARFVDHAKGAQTTALAGTMGYMAPECATSGRASKESDVYSFGVVALEIACGRKPIKYKALENEINIVEWVWGLYGEERIVEAADPRLEGDFEEEQIKCLMIVGLWCAHPDHNNRPSIRQAIQVLNFEAPLPNLPSSLPVPTYLEGPLHSSIAPFSITASEEWSNPDH 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01695 652 FunFam L-type lectin-domain containing receptor kinase IX.1 325 416 - -
Pumo6g01695 652 CDD lectin_legume_LecRK_Arcelin_ConA 10 240 IPR001220 GO:0030246
Pumo6g01695 652 Gene3D - 8 250 - -
Pumo6g01695 652 Pfam Legume lectin domain 10 247 IPR001220 GO:0030246
Pumo6g01695 652 Gene3D Transferase(Phosphotransferase) domain 1 417 629 - -
Pumo6g01695 652 CDD STKc_IRAK 346 610 - -
Pumo6g01695 652 FunFam L-type lectin-domain containing receptor kinase IX.1 8 249 - -
Pumo6g01695 652 Pfam Protein kinase domain 340 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01695 652 SUPERFAMILY Protein kinase-like (PK-like) 325 636 IPR011009 -
Pumo6g01695 652 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
Pumo6g01695 652 FunFam Lectin-domain containing receptor kinase A4.3 417 629 - -
Pumo6g01695 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Pumo6g01695 652 SUPERFAMILY Concanavalin A-like lectins/glucanases 13 242 IPR013320 -
Pumo6g01695 652 SMART serkin_6 340 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01695 652 ProSiteProfiles Protein kinase domain profile. 340 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01695 652 PANTHER - 35 613 - -
Pumo6g01695 652 ProSitePatterns Protein kinases ATP-binding region signature. 346 369 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01695 Pumo-Chr6 25487366 25489932 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01695 46 627 Receptor kinase-like Gene Family AT5G10530 50.508 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pumo6g01695 Pkinase 1.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01695 - - gmx:100817743 1157.9