Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo6g01690 | ATGACCTTCTTTCTGGCACACCCAAACTTTCCAGAACCTGTTCCAAGAGATGGATATGGTCTTGGTCTTGCGAGCCGCGATCAACTGAGGAATCCAAATTTCACAAAGCAATATCCATTTGTAGCAGTGGAATTTGATACCTTTGTTAATGACTGGGATCCTAATTATCATCATGTGGGTATCGATGTTAATTCTGTTGTCGTTTCTGACACTACACAATGGGGCACTAGCATGGATCAGAGAGGATATGATGCTGATATTAGTTATGATTCTGCTTCAAACAAATTAAGTGTCACCGTCACTGGGTATAAGGATAACGACACAATTGAACAGAACTTATCCTCTGAGGTAAATCTGAGAGATATCTTACCTGATTGGGTTCAATTTGGCTTCTCTGCAGCAACAGGATCCTATTACGAGGAACATACTCTTAGCTCATGGTCCTTCAACTCTAGTTTAGACTTCGAACCCGACAAGGGTGGAAGCAAAACAGGGTTGGTGATAGGGCTAAGCGTTGGACTTAGTGCAGCTGTTTTAATTGTTATTTTGGGGGTAGCTTGCCTTGTGAGATGGATGCTGAGGAATAGAGGTATGGAGGATGTCGCACTTTTTAAACATGCTATGGACAATGATTTCGAAAGAATGTCCCTACCCAAGAAGTTTTCCTATGAAGAACTTGCCAGAGCAACTAATAACTTTGCAATAGAAAACAAAATTGGAGAGGGAGGATTTGGGGCAGTCTACAAAGGATTTATAAGAGAGTTGAACACCCATGTTGCCATTAAGAAGGTATCTCGAGGATCTAGACAAGGGGTGAAAGAGTATGCATCTGAAGTAAAGATCATTAGTCAACTGAGGCATAAAAATTTGGTTCAACTCTTTGGGTGGTGCCATGAACACAATGACCTGCTGCTGATTTATGAGTTCATGGAAAATGGAAGCTTGGATTCTTATCTGTTTAAAGGAAAAGGCCTTCTGACATGGAAAGTGAGATATGATATTGCTAGAGGTCTGGCCTCAGCATTATTATACCTGCATGAAGAGTGGGAAGAATGTGTGCTTCATAGAGACATAAAATCCAGCAATGTCATGTTGGATTCTAATTTTGATGCAAAGCTTGGTGATTTTGGTTTAGCCAGGCTATTGGATCATGCAATAGGATCAAAAACAACTGTTTTAGCAGGAACAATTGGATATTTGCCTCCTGAAGCTGTCACAAGAGGCAAGGCTAGTAGGGAGTCTGATGTATACAGTTTTGGGGTTGCTGCTTTGGAGATAGCCTGTGGTAGAAAGGCAATTGAACCTAATCTGAATGAAGAACAGATCTGTTTGGTGGATTGGGTTTGGGAACTCCATGGCATGGGTGATCTCCTTAAAGCATCTGATCCAAGCTTATATGGACACTTTGATGAGAAGGAAATGGAGAGGTTAATGATAGTTAGCCTTTGGTGCACTCACACAGATTTCCTTCTGAGGCCAACAATTAGGCTCGTTGTTCAAGTGCTTAATTTTGAAGCTCCACTTCCCACTCTCACACCACGGGGGCCATCCTCTACCTATAATACATCTTTCAGCTCCATGCCCTCTATGACTTCTGCTTTTGCAAATAACCAACCTGTCTCTTCAACTTCAAGCAGTAGCTTATTCATTGGATCCTCACAATCGAACACAACATTTGAAGTCATTTCTCCAGCAGCTACACATTTACATACCTACTAA | 1719 | 0.4154 | MTFFLAHPNFPEPVPRDGYGLGLASRDQLRNPNFTKQYPFVAVEFDTFVNDWDPNYHHVGIDVNSVVVSDTTQWGTSMDQRGYDADISYDSASNKLSVTVTGYKDNDTIEQNLSSEVNLRDILPDWVQFGFSAATGSYYEEHTLSSWSFNSSLDFEPDKGGSKTGLVIGLSVGLSAAVLIVILGVACLVRWMLRNRGMEDVALFKHAMDNDFERMSLPKKFSYEELARATNNFAIENKIGEGGFGAVYKGFIRELNTHVAIKKVSRGSRQGVKEYASEVKIISQLRHKNLVQLFGWCHEHNDLLLIYEFMENGSLDSYLFKGKGLLTWKVRYDIARGLASALLYLHEEWEECVLHRDIKSSNVMLDSNFDAKLGDFGLARLLDHAIGSKTTVLAGTIGYLPPEAVTRGKASRESDVYSFGVAALEIACGRKAIEPNLNEEQICLVDWVWELHGMGDLLKASDPSLYGHFDEKEMERLMIVSLWCTHTDFLLRPTIRLVVQVLNFEAPLPTLTPRGPSSTYNTSFSSMPSMTSAFANNQPVSSTSSSSLFIGSSQSNTTFEVISPAATHLHTY | 572 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo6g01690 | 572 | CDD | lectin_legume_LecRK_Arcelin_ConA | 1 | 153 | IPR001220 | GO:0030246 | |
Pumo6g01690 | 572 | ProSitePatterns | Legume lectins alpha-chain signature. | 123 | 132 | IPR000985 | - | |
Pumo6g01690 | 572 | ProSitePatterns | Protein kinases ATP-binding region signature. | 239 | 263 | IPR017441 | GO:0005524 | |
Pumo6g01690 | 572 | ProSiteProfiles | Protein kinase domain profile. | 233 | 511 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo6g01690 | 572 | Gene3D | Phosphorylase Kinase; domain 1 | 218 | 309 | - | - | |
Pumo6g01690 | 572 | FunFam | L-type lectin-domain containing receptor kinase IX.1 | 218 | 309 | - | - | |
Pumo6g01690 | 572 | SMART | serkin_6 | 233 | 490 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo6g01690 | 572 | ProSitePatterns | Legume lectins beta-chain signature. | 41 | 47 | IPR019825 | - | |
Pumo6g01690 | 572 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 1 | 153 | IPR013320 | - | |
Pumo6g01690 | 572 | PANTHER | - | 2 | 513 | - | - | |
Pumo6g01690 | 572 | Pfam | Legume lectin domain | 1 | 159 | IPR001220 | GO:0030246 | |
Pumo6g01690 | 572 | FunFam | Lectin-domain containing receptor kinase A4.3 | 310 | 522 | - | - | |
Pumo6g01690 | 572 | SUPERFAMILY | Protein kinase-like (PK-like) | 217 | 528 | IPR011009 | - | |
Pumo6g01690 | 572 | Gene3D | Transferase(Phosphotransferase) domain 1 | 310 | 522 | - | - | |
Pumo6g01690 | 572 | Pfam | Protein kinase domain | 234 | 436 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo6g01690 | 572 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 353 | 365 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo6g01690 | 572 | CDD | STKc_IRAK | 239 | 503 | - | - | |
Pumo6g01690 | 572 | Gene3D | - | 1 | 162 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo6g01690 | Pumo-Chr6 | 25395212 | 25397428 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo6g01690 | 1 | 521 | Receptor kinase-like Gene Family | AT5G10530 | 49.343 | 2.32e-160 | 471 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Pumo6g01690 | Pkinase | 4.9e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo6g01690 | - | - | gmx:100783420 | 942.954 |