Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01690 ATGACCTTCTTTCTGGCACACCCAAACTTTCCAGAACCTGTTCCAAGAGATGGATATGGTCTTGGTCTTGCGAGCCGCGATCAACTGAGGAATCCAAATTTCACAAAGCAATATCCATTTGTAGCAGTGGAATTTGATACCTTTGTTAATGACTGGGATCCTAATTATCATCATGTGGGTATCGATGTTAATTCTGTTGTCGTTTCTGACACTACACAATGGGGCACTAGCATGGATCAGAGAGGATATGATGCTGATATTAGTTATGATTCTGCTTCAAACAAATTAAGTGTCACCGTCACTGGGTATAAGGATAACGACACAATTGAACAGAACTTATCCTCTGAGGTAAATCTGAGAGATATCTTACCTGATTGGGTTCAATTTGGCTTCTCTGCAGCAACAGGATCCTATTACGAGGAACATACTCTTAGCTCATGGTCCTTCAACTCTAGTTTAGACTTCGAACCCGACAAGGGTGGAAGCAAAACAGGGTTGGTGATAGGGCTAAGCGTTGGACTTAGTGCAGCTGTTTTAATTGTTATTTTGGGGGTAGCTTGCCTTGTGAGATGGATGCTGAGGAATAGAGGTATGGAGGATGTCGCACTTTTTAAACATGCTATGGACAATGATTTCGAAAGAATGTCCCTACCCAAGAAGTTTTCCTATGAAGAACTTGCCAGAGCAACTAATAACTTTGCAATAGAAAACAAAATTGGAGAGGGAGGATTTGGGGCAGTCTACAAAGGATTTATAAGAGAGTTGAACACCCATGTTGCCATTAAGAAGGTATCTCGAGGATCTAGACAAGGGGTGAAAGAGTATGCATCTGAAGTAAAGATCATTAGTCAACTGAGGCATAAAAATTTGGTTCAACTCTTTGGGTGGTGCCATGAACACAATGACCTGCTGCTGATTTATGAGTTCATGGAAAATGGAAGCTTGGATTCTTATCTGTTTAAAGGAAAAGGCCTTCTGACATGGAAAGTGAGATATGATATTGCTAGAGGTCTGGCCTCAGCATTATTATACCTGCATGAAGAGTGGGAAGAATGTGTGCTTCATAGAGACATAAAATCCAGCAATGTCATGTTGGATTCTAATTTTGATGCAAAGCTTGGTGATTTTGGTTTAGCCAGGCTATTGGATCATGCAATAGGATCAAAAACAACTGTTTTAGCAGGAACAATTGGATATTTGCCTCCTGAAGCTGTCACAAGAGGCAAGGCTAGTAGGGAGTCTGATGTATACAGTTTTGGGGTTGCTGCTTTGGAGATAGCCTGTGGTAGAAAGGCAATTGAACCTAATCTGAATGAAGAACAGATCTGTTTGGTGGATTGGGTTTGGGAACTCCATGGCATGGGTGATCTCCTTAAAGCATCTGATCCAAGCTTATATGGACACTTTGATGAGAAGGAAATGGAGAGGTTAATGATAGTTAGCCTTTGGTGCACTCACACAGATTTCCTTCTGAGGCCAACAATTAGGCTCGTTGTTCAAGTGCTTAATTTTGAAGCTCCACTTCCCACTCTCACACCACGGGGGCCATCCTCTACCTATAATACATCTTTCAGCTCCATGCCCTCTATGACTTCTGCTTTTGCAAATAACCAACCTGTCTCTTCAACTTCAAGCAGTAGCTTATTCATTGGATCCTCACAATCGAACACAACATTTGAAGTCATTTCTCCAGCAGCTACACATTTACATACCTACTAA 1719 0.4154 MTFFLAHPNFPEPVPRDGYGLGLASRDQLRNPNFTKQYPFVAVEFDTFVNDWDPNYHHVGIDVNSVVVSDTTQWGTSMDQRGYDADISYDSASNKLSVTVTGYKDNDTIEQNLSSEVNLRDILPDWVQFGFSAATGSYYEEHTLSSWSFNSSLDFEPDKGGSKTGLVIGLSVGLSAAVLIVILGVACLVRWMLRNRGMEDVALFKHAMDNDFERMSLPKKFSYEELARATNNFAIENKIGEGGFGAVYKGFIRELNTHVAIKKVSRGSRQGVKEYASEVKIISQLRHKNLVQLFGWCHEHNDLLLIYEFMENGSLDSYLFKGKGLLTWKVRYDIARGLASALLYLHEEWEECVLHRDIKSSNVMLDSNFDAKLGDFGLARLLDHAIGSKTTVLAGTIGYLPPEAVTRGKASRESDVYSFGVAALEIACGRKAIEPNLNEEQICLVDWVWELHGMGDLLKASDPSLYGHFDEKEMERLMIVSLWCTHTDFLLRPTIRLVVQVLNFEAPLPTLTPRGPSSTYNTSFSSMPSMTSAFANNQPVSSTSSSSLFIGSSQSNTTFEVISPAATHLHTY 572
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01690 572 CDD lectin_legume_LecRK_Arcelin_ConA 1 153 IPR001220 GO:0030246
Pumo6g01690 572 ProSitePatterns Legume lectins alpha-chain signature. 123 132 IPR000985 -
Pumo6g01690 572 ProSitePatterns Protein kinases ATP-binding region signature. 239 263 IPR017441 GO:0005524
Pumo6g01690 572 ProSiteProfiles Protein kinase domain profile. 233 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01690 572 Gene3D Phosphorylase Kinase; domain 1 218 309 - -
Pumo6g01690 572 FunFam L-type lectin-domain containing receptor kinase IX.1 218 309 - -
Pumo6g01690 572 SMART serkin_6 233 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01690 572 ProSitePatterns Legume lectins beta-chain signature. 41 47 IPR019825 -
Pumo6g01690 572 SUPERFAMILY Concanavalin A-like lectins/glucanases 1 153 IPR013320 -
Pumo6g01690 572 PANTHER - 2 513 - -
Pumo6g01690 572 Pfam Legume lectin domain 1 159 IPR001220 GO:0030246
Pumo6g01690 572 FunFam Lectin-domain containing receptor kinase A4.3 310 522 - -
Pumo6g01690 572 SUPERFAMILY Protein kinase-like (PK-like) 217 528 IPR011009 -
Pumo6g01690 572 Gene3D Transferase(Phosphotransferase) domain 1 310 522 - -
Pumo6g01690 572 Pfam Protein kinase domain 234 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01690 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 353 365 IPR008271 GO:0004672|GO:0006468
Pumo6g01690 572 CDD STKc_IRAK 239 503 - -
Pumo6g01690 572 Gene3D - 1 162 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pumo6g01690 Pumo-Chr6 25395212 25397428 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01690 1 521 Receptor kinase-like Gene Family AT5G10530 49.343 2.32e-160 471
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pumo6g01690 Pkinase 4.9e-47 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01690 - - gmx:100783420 942.954