Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01652 ATGGACGGCGGCGGCGGCGGGAACCGAGCGGAGGCGGAGCGGTGGCTGTACACTGCGAACAAGCTCCTGAGCGCGCGTGACCTGCACGGAGCGCGCTCCTTCGCGATCCGCGCGCGCGAGTCGGACCCGACCTACGAGGCCTCGGAGCACCTCCTCACGGTGATCGACACGCTCCTCGCCGGCGAATCGCGGATCAACGACCACCACCGCGACTGGTACGGGATCCTCCAAATCCTCCGCTACACCACCAACATGGACCACATCGCCGCCCAGTACCGCCGCCTCGCGCTCCTCCTCGACCCGCACCGAAACCTCTTCGCCTTCGCCAGCCACGCCTTCTCGCTCGTCAACGACGCGTGGTCCGTACTCTCCAACCCCGCGAAGAAAGCCATGTACGACAGCGAGCTCCGGCTGCTCACCACTCCGGCGGCGCCGCCGCCACAACCCCGCCCTCCTCCTCCGCAGCAATCCCAGCCTCAGCCAACGCAGAGGAGAAACCCTAGATCGAGGGACGATTCGGCCGAGGCAACTCGGTCGAATCCGAACCCGAACTCGAACTTGAATCGTTCCGAGTCTGATGAGTCGACTCGGCAGACTCGGACCGTGGAATCTGATACGGGGACGAGTTTCTGGACCTCGTGCCCTTACTGTTATGTTCTGTATGAATACCCGAAGGTGTATGAGGAGTGTACCTTAAGGTGCCAGAGTTGCCGGAGAGGGTTTCATGCTGTGGTGATACGGTCGCCGCCGCCGTTGAGTGGGAAGGACGGTTCTTATTGTAGTTGGGGGTTTTTTCCGTTAGGGTTTTCTGGGAATTCGAAGGATGTGAATGGGTTTGCCTCCAATTGGAACCCGTTTTCCCCCTTGTTTCCTTGCCCCTTGAAGGGGTCGTCCTATAGGAGGCCTCAGAGGAATTGGGCTTACTATGATGACGAGGCTGCGGCCGCGTATATCGAGTTGTCGGACCCGAGTGACGATGATTCTGGTGACGGAGACTGGAGGGGTGGGAAGAATAGGGGGAGTAAGAGGACTAGGGTTCATAAGAGGAAGAATTCTGGTGATGGTAGGAGGGAGACTGTGGAGAGACCTAGGAGGGGCGGTGTTCATGTAGGAAATGAGAATGTGGGTTCTGGTGATCCTGCTGCTGCTAGTGGTAATGCTAATGCTAATGCTGCCAATGCTGTGCCGGCTGGTGCGAGGGCGGAGTCTAGTAAGAAGGCTACGTTGGGCGGTTCGAGGAGGAGGGGTGCCGGAAACTTGGGGAAGTTGGATTTGAATGTGGAGTTCAGCAATGAGGTGGAGGAGCCTTCCCGTGGAGCGCGCGATCGCGAAGGGAATCTTGCTGGACATGCTGAGGATAATATTGAAGGGATTGGGTTTTTTGAAGGCCTTGATGAGTTCCTCAGTAGCTTGCCCATTCTCAATGTTGTGGCAGATGATAAGGTTAAGGGTCATTAG 1458 0.5809 MDGGGGGNRAEAERWLYTANKLLSARDLHGARSFAIRARESDPTYEASEHLLTVIDTLLAGESRINDHHRDWYGILQILRYTTNMDHIAAQYRRLALLLDPHRNLFAFASHAFSLVNDAWSVLSNPAKKAMYDSELRLLTTPAAPPPQPRPPPPQQSQPQPTQRRNPRSRDDSAEATRSNPNPNSNLNRSESDESTRQTRTVESDTGTSFWTSCPYCYVLYEYPKVYEECTLRCQSCRRGFHAVVIRSPPPLSGKDGSYCSWGFFPLGFSGNSKDVNGFASNWNPFSPLFPCPLKGSSYRRPQRNWAYYDDEAAAAYIELSDPSDDDSGDGDWRGGKNRGSKRTRVHKRKNSGDGRRETVERPRRGGVHVGNENVGSGDPAAASGNANANAANAVPAGARAESSKKATLGGSRRRGAGNLGKLDLNVEFSNEVEEPSRGARDREGNLAGHAEDNIEGIGFFEGLDEFLSSLPILNVVADDKVKGH 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01652 485 MobiDBLite consensus disorder prediction 140 207 - -
Pumo6g01652 485 SMART dnaj_3 70 128 IPR001623 -
Pumo6g01652 485 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 357 - -
Pumo6g01652 485 MobiDBLite consensus disorder prediction 321 419 - -
Pumo6g01652 485 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
Pumo6g01652 485 Gene3D DnaJ domain 60 142 IPR036869 -
Pumo6g01652 485 Pfam DnaJ domain 71 133 IPR001623 -
Pumo6g01652 485 MobiDBLite consensus disorder prediction 176 192 - -
Pumo6g01652 485 MobiDBLite consensus disorder prediction 351 368 - -
Pumo6g01652 485 CDD DnaJ 71 125 IPR001623 -
Pumo6g01652 485 ProSiteProfiles dnaJ domain profile. 71 136 IPR001623 -
Pumo6g01652 485 MobiDBLite consensus disorder prediction 142 160 - -
Pumo6g01652 485 SUPERFAMILY Chaperone J-domain 67 137 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01652 Pumo-Chr6 24406475 24408658 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01652 11 484 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 44.467 9.39e-113 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01652 - - gmx:100811866 783.482