Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01648 ATGGACGGCGGCGGCGGCGGGAACCGAGCGGAGGCGGAGCGGTGGCTGTACACTGCGAACAAGCTCCTGAGCGCGCGTGACCTGCACGGAGCGCGCTCCTTCGCGATCCGCGCGCGCGAGTCGGACCCGACCTACGAGGCCTCGGAGCACCTCCTCACGGTGATCGACACGCTCCTCGCCGGCGAATCGCGGATCAACGACCACCACCGCGACTGGTACGGGATCCTCCAAATCCTCCGCTACACCACCAACATGGACCACATCGCCGCCCAGTACCGCCGCCTCGCGCTCCTCCTCGACCCGCACCGAAACCTCTTCGCCTTCGCCAGCCACGCCTTCTCGCTCGTCAACGACGCGTGGTCCGTACTCTCCAACCCCGCGAAGAAAGCCATGTACGACAGCGAGCTCCGGCTGCTCACCACTCCGGCGGCGCCGCCGCCGCAACCCCGCCCTCCTCCTCCGCAGCAATCCCAGCCTCAGCCAACGCAGAGGAGAAACCCTAGATCGAGGGACGATTCGGCCGAGGCAACTCGGTCGAATCCGAACCCGAACTCGAACTTGAATCGTTCCGAGTCTGATGAGTCGACTCGGCAGACTCGGACCGTGGAATCTGATACGGGGACGAGTTTCTGGACCTCGTGCCCTTACTGTTATGTTCTGTATGAATACCCGAAGGTGTATGAGGAGTGTACCTTAAGGTGCCAGAGTTGCCGGAGAGGGTTTCATGCTGTGGTGATACGGTCGCCGCCGCCGTTGAGTGGGAAGGACGGTTCTTATTGTAGTTGGGGGTTTTTTCCGTTAGGGTTTTCTGGGAATTCGAAGGATGTGAATGGGTTTGCCTCCAATTGGAACCCGTTTTCCCCCTTGTTTCCTTGCCCCTTGAAGGGGTCGTCCTATAGGAGGCCTCAGAGGAATTGGGCTTACTATGATGACGAGGCTGCGGCCGCGTATATCGAGTTGTCGGACCCGAGTGACGATGATTCTGGTGACGGAGACTGGAGGGGTGGGAAGAATAGGGGGAGTAAGAGGACTAGGGTTCATAAGAGGAAGAATTCTGGTGATGGTAGGAGGGAGACTGTGGAGAGACCTAGGAGGGGCGGTGTTCATGTAGGAAATGAGAATGTGGGTTCTGGTGATCCTGCTGCTGCTAGTGGTAATGCTAATGCTAATGCTGCCAATGCTGTGCCGGCTGGTGCGAGGGCGGAGTCTAGTAAGAAGGCTACGTTGGGCGGTTCGAGGAGGAGGGGTGCCGGAAACTTGGGGAAGTTGGATTGA 1275 0.5953 MDGGGGGNRAEAERWLYTANKLLSARDLHGARSFAIRARESDPTYEASEHLLTVIDTLLAGESRINDHHRDWYGILQILRYTTNMDHIAAQYRRLALLLDPHRNLFAFASHAFSLVNDAWSVLSNPAKKAMYDSELRLLTTPAAPPPQPRPPPPQQSQPQPTQRRNPRSRDDSAEATRSNPNPNSNLNRSESDESTRQTRTVESDTGTSFWTSCPYCYVLYEYPKVYEECTLRCQSCRRGFHAVVIRSPPPLSGKDGSYCSWGFFPLGFSGNSKDVNGFASNWNPFSPLFPCPLKGSSYRRPQRNWAYYDDEAAAAYIELSDPSDDDSGDGDWRGGKNRGSKRTRVHKRKNSGDGRRETVERPRRGGVHVGNENVGSGDPAAASGNANANAANAVPAGARAESSKKATLGGSRRRGAGNLGKLD 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01648 424 MobiDBLite consensus disorder prediction 140 207 - -
Pumo6g01648 424 Gene3D DnaJ domain 60 142 IPR036869 -
Pumo6g01648 424 SMART dnaj_3 70 128 IPR001623 -
Pumo6g01648 424 SUPERFAMILY Chaperone J-domain 67 137 IPR036869 -
Pumo6g01648 424 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 357 - -
Pumo6g01648 424 MobiDBLite consensus disorder prediction 321 424 - -
Pumo6g01648 424 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
Pumo6g01648 424 Pfam DnaJ domain 71 133 IPR001623 -
Pumo6g01648 424 MobiDBLite consensus disorder prediction 176 192 - -
Pumo6g01648 424 MobiDBLite consensus disorder prediction 351 368 - -
Pumo6g01648 424 CDD DnaJ 71 125 IPR001623 -
Pumo6g01648 424 ProSiteProfiles dnaJ domain profile. 71 136 IPR001623 -
Pumo6g01648 424 MobiDBLite consensus disorder prediction 142 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01648 Pumo-Chr6 24243020 24245202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01648 11 424 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 41.549 6.54e-86 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01648 - - gmx:100811866 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01648 6 24243020 24245202 Pumo2g01030 2 15420362 15422338 PCT