LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo6g01643	ATGGTTAAGGCTGACGGGTCTTTGCCTCGCCCACACCATGTGGCTTGGCAATCACCTTCTTCGAATTACTTCAGCATGCTACCTAAGCCCAGCTTACTTGGTCTTCCAACATATCTGAATTCAAGCACTTCCATCTTGCCAATGCCTGCTGTCAGTACATTTCGTGGGCTTGCAGCTCCTTCTATCCCAAGTCTGAAGACTGAGCTAACAAATGAAGTGCAAGGATTCCTTCAGTATACCAATGCAGACACAAGTTTAAAAGAAACACATGTTGGAGGAGCTTTACAAAATGCAAATCCTTCTTCTTTGCAGAAGAGGTTACTGATCTTTGACCGCTCTGATAATAAGACAAGGTTGTTTTATGGTCCTGTCCTCCCTCTTGTCCAGAGTCCAACTGTTACTGCTACAAAGTTTGCTCAAAGTTATGGCGTTAATAGGGAGGGACAGGCCAGTAATGTGGGTCAAAAGCATCTTGCCAGTTACAGTTTACTGGAAGAGTCTGTTAAGGATCATGCAGTTATTGAAGAAAGTGAAAATCATGAAGATACAGAAGAAATAAATGCATTGCTTTATTCTGATGATGACAGCAGTGAAGATGATGATGATAGTTGTGATGAGGTAACAAGTACAGATCGTTCTCCTTTGGCAACTAAAACAACTTATGTGATACAAGAACAATTTGAAGACACGAAGGAGGAGGTTGCTAGCTCTGATTGGCCTAACAAAAGGCTGAAGTTATTTGATGGTGACTATAGTAGATCATCCCCAACTGTGGACAGGTATAGTTTGGTAAGACCAAATGAAACCTGTGATTGTGTCAGTGATGCTGAATCAAAGAATTCTAGTGGCTGGGCATATTCTGTTGATAAAACTAAAGTAGATAATTCAGTGGCTTGCGATATCAAATTAAAAAAGGATAAGATCCGTGAATCATTCAAAGTTCTTGAGAATTTAATTCCTGGTGCAAAAGGAAAGGAGCCACTGTTAGTCATTGATGGAACTATTGAGTACTTGAAAATTTTGATGTCCCAAACTGGTGTTCTTGGGGTGAAATATCACTAA	1062	0.404	MVKADGSLPRPHHVAWQSPSSNYFSMLPKPSLLGLPTYLNSSTSILPMPAVSTFRGLAAPSIPSLKTELTNEVQGFLQYTNADTSLKETHVGGALQNANPSSLQKRLLIFDRSDNKTRLFYGPVLPLVQSPTVTATKFAQSYGVNREGQASNVGQKHLASYSLLEESVKDHAVIEESENHEDTEEINALLYSDDDSSEDDDDSCDEVTSTDRSPLATKTTYVIQEQFEDTKEEVASSDWPNKRLKLFDGDYSRSSPTVDRYSLVRPNETCDCVSDAESKNSSGWAYSVDKTKVDNSVACDIKLKKDKIRESFKVLENLIPGAKGKEPLLVIDGTIEYLKILMSQTGVLGVKYH	353

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo6g01643	353	PANTHER	TRANSCRIPTION FACTOR BHLH145	11	351	IPR037546	-
	Pumo6g01643	353	MobiDBLite	consensus disorder prediction	191	212	-	-
	Pumo6g01643	353	MobiDBLite	consensus disorder prediction	191	206	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo6g01643	Pumo-Chr6	24073198	24077056	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo6g01643	92	341	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT5G09460	35.433	2.11e-19	85.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo6g01643	-		-	gmx:100817942	619.002