Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01626 ATGGCATACAAGAATGCAATCCTCACTGTTGAAAACAAAGATGTTATATTCATCAAACCTTCAAAATCCACTCCTACCACTATTCTTTCACTCTCTAGCATTGACAATGCTCCCGATAACGATTACTTCATGCAAAGCCTTCATGTATACCGATCGGCAAATCACAATTCCCATAATACCAAACTTGACCCTGCAAAAGTGATCAAAGATGCCCTCTCAGAGGCTCTCTTTTACTATCATCCTCTTGCCGGAAAGCTAGTAAGACATGCTGATGGAAAACTCAGAATCAACTGCAACTCCGAAGGAGTTCCATTCATAGAGGCTATTTGTAACTGCAACCTCTCATCTCTTCATTACCTAGATGGCAATGGCGTTGAATTCGCAAAACACTTTGGGATCGATTTTCCTTCTCAAGATGAATTTGGAAACCAATATCCTTTGGTTTTGAAGGTGACTAAATTTCTCTGTGGGGGTTTCACATTTGTAGTGGGCTTGTCCCACGCTATTTTTGACGGTACTGGGCAATCTCAGTTGTTACGCGCAGTGGCTGAACTTGCAAGTGGAAAAACTGAGCCCTCTGTGAAGCCTGTGTGGGAAAGAGAGAGACTGGTGGGCAAATTTACTAGTCAACCCATGCAAAATCCCATGGATGTGGCTTCTTTTGCAGTTTCACCATTTCTGCCAACCACGGATTATTCGCATGAATGCTCTAGGGTGGACAGTGAGAGCATAACAAGACTCAAGATGAGTTTGATGAAAGAAAGTATAATTAAGAAAAAAGGATTCACAACTTTTGAAACCCTAGCTGCGTACATCTGGAGGTCAAGAACTAGAGCCATGAAACTAAGTTACGATAGGAAAACATTGCTGGTTATCACAGTGGGGCTGAGACCGCACTTGCTGGATCCTTTGCCGGATGGATATTACGGAAATGCCATCATGGATGCATTTGTTACGTTAACAGTGAGGGAGCTGAACGAACGACCGTTCTTGGAGGTTGTGAAACTCATCAGAGATAGCATAAAAGTTGCTTCTGGTCATGACTATATTAGACACTCAATCGACAGTATGCATACGAAGCCAATGGAATATTATTATGAAAGAGGTGGAATAACGTTTATAACCGATTGGAGACATTTGGGTTTGTTGGAAAAGGTTGATTTTGGGTGGAAGGAGCCGGTGAATACGATGCCAGTCCCATCGTACATGTATGGATTAACGGGTTTGTGCAATATCTTGCCTCCCAGTAATTTGGATCCTTCAGTGAGTGGAGGAGCGAGGGTTTACGTATCCCTGCCTAGTGCTGCCATGCCCAAGTTCAAAAAAGAGATGAAAGCTCTAACCAGTTTCCACAAGATAAATTCAAAATTTTAA 1374 0.4243 MAYKNAILTVENKDVIFIKPSKSTPTTILSLSSIDNAPDNDYFMQSLHVYRSANHNSHNTKLDPAKVIKDALSEALFYYHPLAGKLVRHADGKLRINCNSEGVPFIEAICNCNLSSLHYLDGNGVEFAKHFGIDFPSQDEFGNQYPLVLKVTKFLCGGFTFVVGLSHAIFDGTGQSQLLRAVAELASGKTEPSVKPVWERERLVGKFTSQPMQNPMDVASFAVSPFLPTTDYSHECSRVDSESITRLKMSLMKESIIKKKGFTTFETLAAYIWRSRTRAMKLSYDRKTLLVITVGLRPHLLDPLPDGYYGNAIMDAFVTLTVRELNERPFLEVVKLIRDSIKVASGHDYIRHSIDSMHTKPMEYYYERGGITFITDWRHLGLLEKVDFGWKEPVNTMPVPSYMYGLTGLCNILPPSNLDPSVSGGARVYVSLPSAAMPKFKKEMKALTSFHKINSKF 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01626 457 Gene3D - 228 444 IPR023213 -
Pumo6g01626 457 Gene3D - 6 222 IPR023213 -
Pumo6g01626 457 PANTHER ACYL TRANSFERASE 4 8 446 - -
Pumo6g01626 457 Pfam Transferase family 10 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01626 Pumo-Chr6 23713788 23715161 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01626 8 442 Monolignol Biosynthesis Gene Families AT5G48930 27.293 3.23e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01626 K20240 - gmx:100783730 789.645