Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01625 ATGGCATATGAGAATGCAACCCTCACTGTTGAAAACAGAGAGGTTATATTCATCAAACCTTCAAAACCCACTCCTACAACCATTCTTTCACTGTCTAGCATTGACAATGCTCCCGAGAACTATTTCTTCACGCAAAGCCTTCATGTATACCGATCTCCAAATCAAAATTCCCCTAACACTACCAAACTTGACCCTGCAAAAGTGATCAAAGAGGCCCTCTCAAAGGCTCTCTTTTACTATTATCCTCTTGTAGGAAAGCTTGTAAGACACGTTGATGGAAAACTCAGAATCAACTGCAACTCTGAAGGAGTTCCATTCATAGAGGCTATTTGTAATTGCAACCTTTCATCTCTTCATTACCTAGATGGCAATGGCGTTGAATTCGCAAAACACTTTGGGATCGATTTTCCTTCTCAAGATGAATTTAGAAACCAGTGTCCTTTGGTTTTGAAGGTGACTAAATTCCTGTGTGGGGGTTTCATATTTGCAGTGGGCTTGTGCCACGCTGTTTGTGACGGGACTGGGAAATCTCAGTTCTTACGCGCATTGACTGAACTTGCAAGTGGAAAAAAAAGTGAGCCCTCTGTGAAGCCTGTGTGGGAGAGAGAGAGACTAGTGGGAACAATCATTAGTCAACCCATGCAAAATCCAATGGACAAGGCCTCTCTTGCAGTTTCACCATTTCTGCCAACCATGGATTATTTGCACGAATGCTCGAAGGTGAACTGTGAGAGCATTGCAAGACTCAAGATGAGTTTGATGAAAGAGAGTGACAACGAAGAATGCATGACTAAGAAGAAAGGGTTCACAACTTTTGAAACCCTCGCTGCGTACATCTGGAGGTCAAGAACCAGAGCCTTGAAACTGAGCTACGATGGGGAAACTATTCTGGTTATCATTGTGGGGGTGAGACCACACTTGCTGGATCCTTTGCCCATTGGATATTACGGAAATACCATCGTGGAAGCATATGTTACTATAACCGTGAGGGAGCTGAACGAAAGACCTCTCTTGGAGGTTGTGAAACTCATCCGAGAGAGCATAAAGGCTGCTTTTAGCAGTGATTATATCAGACACTCGATCGACAGTATGGAGACGAAACCAATGAAATTTAATTACGAAAGTGGTGCAATAATGACTTTGACAGATTGGAGACATTTGGGATTGTTGGAGAAAGTTGATTTTGGATGGAATGAGCCAGTGAATACGACGCCAGTCCCATCGGACATGTATGGATTAACGGGTTTGTGCAGGATCTTGCCTCCCAGTAATTTGGATCCTTCAATGAGTGGAGGAGCAAGGGTTTATGTAAGCCTACCCAGTCCTGCCATGCCCAAGTTCAAGGAAGAGATGAAAGCTCTTACCACTATCCAAAAGAGAAACTATATTTAA 1392 0.4325 MAYENATLTVENREVIFIKPSKPTPTTILSLSSIDNAPENYFFTQSLHVYRSPNQNSPNTTKLDPAKVIKEALSKALFYYYPLVGKLVRHVDGKLRINCNSEGVPFIEAICNCNLSSLHYLDGNGVEFAKHFGIDFPSQDEFRNQCPLVLKVTKFLCGGFIFAVGLCHAVCDGTGKSQFLRALTELASGKKSEPSVKPVWERERLVGTIISQPMQNPMDKASLAVSPFLPTMDYLHECSKVNCESIARLKMSLMKESDNEECMTKKKGFTTFETLAAYIWRSRTRALKLSYDGETILVIIVGVRPHLLDPLPIGYYGNTIVEAYVTITVRELNERPLLEVVKLIRESIKAAFSSDYIRHSIDSMETKPMKFNYESGAIMTLTDWRHLGLLEKVDFGWNEPVNTTPVPSDMYGLTGLCRILPPSNLDPSMSGGARVYVSLPSPAMPKFKEEMKALTTIQKRNYI 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01625 463 Gene3D - 232 451 IPR023213 -
Pumo6g01625 463 Pfam Transferase family 9 453 - -
Pumo6g01625 463 PANTHER ACYL TRANSFERASE 4 8 453 - -
Pumo6g01625 463 Gene3D - 5 215 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01625 Pumo-Chr6 23683755 23685146 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01625 8 449 Monolignol Biosynthesis Gene Families AT5G48930 27.158 7.72e-37 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01625 K20240 - gmx:100783730 738.028