Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01615 ATGGCGGAGCCTGCTTCTTTCGGATTGGGACCTCGATTAGGTGTGAATGGCTTGGACTTTGGATTGATCTTCAGCAATTACAACTTGAAGCCCAGCACAGGTGGTTGCGCCCTGCAGAAATATGTGAAATTCTTCGCAACTTATCGGATGTTTCAAATCACATCAGAACCACCTAACAGGCCACCAAGTGGTTCCCTTTTTCTATTTGATCGGAAGGTTTTAAGGTACTTTAGAAAAGATGGACATAATTGGAGAAAGAAAAAAGATGGAAAGACTGTGAAGGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTGTTACACTGCTACTATGCCCATGGAGAAGAAAATGAAAATTTTCAGAGGCGAAGCTATTGGATGCTTGAACCGGATATGATGCATATAGTATTTGTCCACTACTTGGATGTTAAGGTTAACAAAACCAATATTGGTGGAAAAACATATTCTGATGAGGCTACATCAGATTCCCAGAAGAGCAGTTCTTTGTCATCTGGCTTTCCCAGAAATTATGGTAGTGTACCTTCAGGAAGTACAGATTCCATGAGCCCAACCAGTACTCTGACATCTTTATGCGAAGATGCCGATTCAGAGGATATTCATCAAGCAAGTTCAGGATTACACTCCTATCGTGAATCACAAAATTTGGGGAATGATCGTCTGGTGGATAAGATTGATGCTCGTTCAAATAGTTCATATCTTATGCATCCATTTTCAGGTGATCATGGACAGTTACCAGTTTCTGGAGCAGAATATATCCCACTTGTTCAGGGGGATAAGTCTAGAGCTAGTGATACTACTTACATTGAGGGTCAGAGAGCACATGGCATTGCATCCTGGGACAATGGCATGGAACAGTCTGCAGGAAAGCATACTGATCCTTCTCTTGTATCATCTACATCCATTCCATCAAGTGCAACGGGAAACATCCTTGAAGAAAACCATACTGTTCCAGGCAACCTTTTGGGGCGTAAAAATGCCCTCACTGAAGAGGAAAGGGGCTCTCAGCCTGTCCAATCAAATTGGCAGATTCCTTTTGAAGACAATACAGGAGAATTGCCTAATTGGAGCCTTACCCAATCATTGGGTTTGGAATTTGGATCTGATTATGGTGCTAGTTTACTGGGGGGTGTAACTAATAATGCAGGCCCAGAAATTGTTCTGAGCTGTTCACTTTTAATGGTGAGTTAA 1212 0.4216 MAEPASFGLGPRLGVNGLDFGLIFSNYNLKPSTGGCALQKYVKFFATYRMFQITSEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEPDMMHIVFVHYLDVKVNKTNIGGKTYSDEATSDSQKSSSLSSGFPRNYGSVPSGSTDSMSPTSTLTSLCEDADSEDIHQASSGLHSYRESQNLGNDRLVDKIDARSNSSYLMHPFSGDHGQLPVSGAEYIPLVQGDKSRASDTTYIEGQRAHGIASWDNGMEQSAGKHTDPSLVSSTSIPSSATGNILEENHTVPGNLLGRKNALTEEERGSQPVQSNWQIPFEDNTGELPNWSLTQSLGLEFGSDYGASLLGGVTNNAGPEIVLSCSLLMVS 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01615 403 SMART CG_1_2 38 145 IPR005559 GO:0003677
Pumo6g01615 403 ProSiteProfiles CG-1 DNA-binding domain profile. 17 150 IPR005559 GO:0003677
Pumo6g01615 403 MobiDBLite consensus disorder prediction 290 319 - -
Pumo6g01615 403 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 47 307 - -
Pumo6g01615 403 MobiDBLite consensus disorder prediction 155 196 - -
Pumo6g01615 403 Pfam CG-1 domain 49 143 IPR005559 GO:0003677
Pumo6g01615 403 MobiDBLite consensus disorder prediction 292 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01615 Pumo-Chr6 23546146 23552359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01615 1 378 CAMTA Transcription Factor Family AT5G64220 42.368 3.45e-74 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01615 K21596 - gmx:100795682 669.848