Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01610 ATGGGTTCTAGTATTGGAGATGGTCTTAGTGTGTGTTTGGTTTCACATTTAGAACCAATAATAAGCTTCCTTCCACTGCAATTTCAATATCAATTCAATAATAGTAATAATTATCAGCACCATTTCCATTTTCCATGGCAAACCCTAAAACGAAAAGTTCCCATTCGATGGGCGGCTGAGGACGATCCCGACTCCGCCGAATCGCGGTGGGTCTTCCAGGAGGACGAGGATCCCTCCGAGATCGAGGACTTCGACGCCGCCGATTTGCGCCACCATTCCATGTTCGATTCCGAGGACGAGGACAATGCCGAACAGAGACTCGTTCGCACCGGTCCGCGAATCGATTCCTTCGACGTCGAAGCTCTCGAGGTTCCCGGCGCCCAGAGAAATGACTACGAGGATGTTAGTGTCGGAAAGGGAATTGTGTTGGCTTTTCAGACTCTCGGTGTTGTGTTTGGTGATGTTGGAACGAGTCCTTTGTATACCTTCAGTGTTATGTTTAGGAAGGCTCCTATTAATGTGGTACATTTGCAGTTGTACTCCTTGATTTGTCGAAATGCTAAGGTGAGTCTTCTTCCCAATCAGTTGCCGTCGGATGCCCAAATATCGGGCTTTAGGCTAAAGGTGCCATCTCCTGAGCTTGAAAGGTCTTTAAAAATCAAGGAGAAGCTAGAGACTTCAGTGACTCTGAAGAAGATTCTACTATTATTTGTTCTTGCTGGTATTTCCATGGTGATAGCTAACGGGGTTGTTACACCAGCAATGTCAGTTCTATCATCTCTCAATGGTTTGAAAGTTGGGGTAGATGCAATTCAGCAAGATGAAGTGGTGATGATTTCTGTTGCCTGCCTTGTCATTTTGTTCAGTGTACAGAAGTATGGAACAAGTAAAGTGGGGCTTGCTGTAGGACCTGCTTTGTTTATATGGTTTTGTTCTCTTGCGGGCATTGGTATATACAACCTTGTCAAATATGACAGCAGTGTCTTGAGGGCATTTAATCCTATTTACATATATTATTTCTTTGCAAGGAATTCAACTAAAGCATGGTATTCGCTTGGGGGCTGCATTCTGTGTGCAACTGGCTCTGAGGCTATGTTTGCAGATCTTTGCTATTTCTCTGTACGATCAGTTCAGCTTACATTTGTATTTCTTGTTCTACCGTGCCTACTGTTGGGTTATTTGGGTCAAGCTGCATACCTTATGGAAAACCATGCTGATGCTGGTAATGCCTTTTATTCTTCTGTTCCAAGTGGTGCATTCTGGCCAACTTTCCTCATCGCTAACATTGCTGCATTAATTGCAAGTCGGGCTATGACAACAGCCACATTTTCTTGTATAAAACAGTCAGCTGCACTTGGTTGTTTCCCTCGTCTTAAAATAATTCATACCTCTCGGAAATTTATGGGCCAAATCTATATCCCTGTCATAAACTGGTTTCTTTTGGCTGTTTCTTTGGTGCTTGTCTGTTCTATATCCAGCGTTGATGAGATTGGAAATGCATATGGCATTGCTGAGCTGGGGGTGATGATGATGACCACTATTTTAGTAACTCTTGTTATGCTTCTTATATGGCAGTTACACATCATTGTAGTGCTGAGTTTCGCGGTAGTCTTCCTGGGATTGGAGTTGACTTTCTTTTCATCAGTTTTGTGGAGTGTAACAGATGGAAGTTGGATTATATTGGTCTTTGCGGTAATAATGTTTTTTATAATGTTTGTATGGAATTATGGGAGCAAGCTCAAGTATGAAACTGAAGTAAAGCAAAAGCTGTCAATGGATTTGATGCGAGAATTAGGCTGCAATCTTGGGACAATACGAGCTCCTGGGATTGGTTTGCTCTATAATGAGTTGGTCAAAGGAATTCCAGGCATTTTTGGGCATTTTCTGACCACACTTCCAGCAATACACTCTATGATCATATTTGTGAGTATTAAGTATGTTCCAGTTGCTATGGTGCCTCAAAGTGAAAGGTTCCTTTTTCGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGTTGTATTGCCAGGTATGGTTACAAAGATGTTCGCAAAGAAAATCACCAAACTTTTGAGCAACTGCTTATGGAGAGCCTAGAGAAGTTTATACGTCGTGAGGCTCAGGAGAGGTCACTTGAAAGTGATGGGGATGATGATACTGATTCTGAGGATGAGTACTCTGGTTCTAGGGTTCTCATAGCTCCCAATGGGAGTGTTTATTCACTTGGGGTTCCTCTTCTGGCTGATTTTAATGCTGCAACCATACCCATACCCAATTTTGAAGCAAGCACATCTGAGGAGGCAAACCCTGAATCTCCTAAGCCCCCAGTAGTTGATGCTGAGCAGAGTCTTGAAAGAGAATTATCTTTTATACGCAAGGCTAAAGAATCTGGAGTTGTTTATCTTCTTGGTCACGGGGATATAAGGGCAAGAAAAGACTCATGGTTTATCAAGAAGCTAATTATAAACTATTTTTATTCCTTTCTGAGAAAGAACTGCCGAAGGGGGCTCACAAATTTAAGTGTACCCCATTCACATTTGATGCAGGTTGGCATGACCTACATGGTTTGA 2568 0.4252 MGSSIGDGLSVCLVSHLEPIISFLPLQFQYQFNNSNNYQHHFHFPWQTLKRKVPIRWAAEDDPDSAESRWVFQEDEDPSEIEDFDAADLRHHSMFDSEDEDNAEQRLVRTGPRIDSFDVEALEVPGAQRNDYEDVSVGKGIVLAFQTLGVVFGDVGTSPLYTFSVMFRKAPINVVHLQLYSLICRNAKVSLLPNQLPSDAQISGFRLKVPSPELERSLKIKEKLETSVTLKKILLLFVLAGISMVIANGVVTPAMSVLSSLNGLKVGVDAIQQDEVVMISVACLVILFSVQKYGTSKVGLAVGPALFIWFCSLAGIGIYNLVKYDSSVLRAFNPIYIYYFFARNSTKAWYSLGGCILCATGSEAMFADLCYFSVRSVQLTFVFLVLPCLLLGYLGQAAYLMENHADAGNAFYSSVPSGAFWPTFLIANIAALIASRAMTTATFSCIKQSAALGCFPRLKIIHTSRKFMGQIYIPVINWFLLAVSLVLVCSISSVDEIGNAYGIAELGVMMMTTILVTLVMLLIWQLHIIVVLSFAVVFLGLELTFFSSVLWSVTDGSWIILVFAVIMFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPGIFGHFLTTLPAIHSMIIFVSIKYVPVAMVPQSERFLFRRVCQRSYHIFRCIARYGYKDVRKENHQTFEQLLMESLEKFIRREAQERSLESDGDDDTDSEDEYSGSRVLIAPNGSVYSLGVPLLADFNAATIPIPNFEASTSEEANPESPKPPVVDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLIINYFYSFLRKNCRRGLTNLSVPHSHLMQVGMTYMV 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01610 855 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 178 853 IPR003855 GO:0015079|GO:0016020|GO:0071805
Pumo6g01610 855 NCBIfam potassium uptake protein 177 855 IPR003855 GO:0015079|GO:0016020|GO:0071805
Pumo6g01610 855 Pfam K+ potassium transporter 144 681 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01610 Pumo-Chr6 23450321 23458894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01610 64 855 Inorganic Solute Cotransporters AT5G09400 74.190 0.0 1229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01610 - - gmx:100803841 1442.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01610 6 23450321 23458894 Pumo6g01610 6 23450321 23458894 ECH
Pumo6g01610 6 23450321 23458894 Pumo2g01092 2 15994934 16001034 PCT