Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01595 ATGGCAGCTGCAACATCTAGCGCTGTGTTAAATGGGTTTGGATCTCACTTCTTATGTGGAGGAAAGAGGAGCCATGCCTTGCTTGCTGCTGGCATTGGAGGCAAAGTTGGTGCTGCTGTTAGTCCTAGAAGAGTTATTGTGGCAGTTGCTGCTGCACCAAAGAAGTCATGGATCCCTGCTGTGAAAGGTGGTGGGAATTTCATTGACCCTGAATGGCTTGATGGCTCGCTACCAGGTGACTATGGTTTTGACCCACTAGGACTAGGAAAGGACCCAGCATTCCTCAAATGGTATAGAGAAGCTGAACTCATTCATGGGAGGTGGGCAATGGCTGCAGTTGTGGGCATCTTTATTGGGCAGGCCTGGAGTGGAGTTCCATGGTTTGAGGCTGGAGCTGATCCTAATGCAATTGCTCCTTTCTCCTTTGGTTCTCTTTTGGGTACCCAGTTGCTCCTAATGGGATGGGTTGAGAGCAAGAGATGGGTGGACTTCTTCAACCCAGATTCTCAGTCAGTGGAATGGGCCACCCCATGGTCAAGAACTGCTGAGAACTTTAGCAACTCTACTGGTGATCAAGGCTACCCTGGGGGCAAATTCTTTGACCCTTTGGGATTTGCTGGCACAATCAAGGATGGTGTTTACATTCCAGATGCAGACAAGCTAGAGAGACTGAAACTGGCTGAGATTAAGCATGCTAGGATTGCAATGCTGGCTATGCTGATTTTCTACTTTGAGGCTGGACAGGGGAAGACACCCCTTGGTGCTCTTGGCTTGTAA 777 0.4916 MAAATSSAVLNGFGSHFLCGGKRSHALLAAGIGGKVGAAVSPRRVIVAVAAAPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFSNSTGDQGYPGGKFFDPLGFAGTIKDGVYIPDADKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01595 258 Pfam Chlorophyll A-B binding protein 70 246 IPR022796 -
Pumo6g01595 258 Gene3D Chlorophyll a/b binding protein domain 70 257 - -
Pumo6g01595 258 FunFam Chlorophyll a-b binding protein, chloroplastic 70 257 - -
Pumo6g01595 258 SUPERFAMILY Chlorophyll a-b binding protein 67 258 - -
Pumo6g01595 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 69 256 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01595 Pumo-Chr6 23332072 23333325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01595 1 258 Chloroplast and Mitochondria Gene Families AT1G15820 80.620 1.28e-152 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01595 K08917 - gmx:100783223 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01595 6 23332072 23333325 Pumo2g01102 2 16077225 16078953 PCT