Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01576 ATGGCTTCTCTTGGCACTAGTAGCAATGAAATGCCAATTGACCATATTGAGATTCTCATACATTTTAATGATATAGAAGAAAACCCTAGCCAAGACATTGAAGAAAACAATTTTGAGGACTCTCAAAGGGCACAGTGGCTTGGGGCAGCTGTGTTGGGAGCCAAAAATGGGTTGGTCTTAATCACCTTACTGATGATGGGTGTTGAAGCTTTGAATGAAGACATGACAACCATGCTTCTTGCCGGCTTAGCAGGACTAGTTGTTGGGGCTTGCAGTATGGCAATTGAAGAATTTGTATACACTCAGTTAGACACAGAGGTAGCTCAAATGAAAGTCCACAATAACAAACACAAAGAAGTGGAGGAAGATGACAAACAACTTAACCCTATTCAGGCTTCCATAGCATCAGCAATTGGATTTTCTATCGGTGCTGTGGTGTCAGTGCTAGCAGCTGTTTTTATTAGGGACTATAAGATCAGGTTACTAGTTTTTGCTGTGTCTATGCTGGCATTGTTGGTATTTGGAGGTGTAGGAGCAGTACTTGGTAAAAGTAAAACACCAGTGAGAAGGACTTGTGATAGTGCTGATTGGAGGTTGGATGACTATGGCTATTACTTTTGGCTTTGA 627 0.4147 MASLGTSSNEMPIDHIEILIHFNDIEENPSQDIEENNFEDSQRAQWLGAAVLGAKNGLVLITLLMMGVEALNEDMTTMLLAGLAGLVVGACSMAIEEFVYTQLDTEVAQMKVHNNKHKEVEEDDKQLNPIQASIASAIGFSIGAVVSVLAAVFIRDYKIRLLVFAVSMLALLVFGGVGAVLGKSKTPVRRTCDSADWRLDDYGYYFWL 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01576 208 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 27 189 IPR008217 GO:0005384|GO:0030026
Pumo6g01576 208 Pfam VIT family 48 121 IPR008217 GO:0005384|GO:0030026
Pumo6g01576 208 Pfam VIT family 113 189 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01576 Pumo-Chr6 22942153 22942779 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01576 23 191 Nodulin-like Gene Family AT3G43660 50.000 5.33e-47 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01576 K22736 - gmx:100527486 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01576 6 22942153 22942779 Pumo6g01576 6 22942153 22942779 ECH