Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01575 ATGGCCAACCCCGGAGCTAGAACAAATGGAATATCAACAAACCATGTTGAGATCCCTATCCATTCAAATGGTGTAGAGCTAAAACCAATCCAAGAGGTTGCTGAGAGTAGCATTGACTACTCTCAAAGGGCTCAGTGGCTTCGAGCCGCGGTGTTGGGAGCCAATGATGGGTTGGTTTCTGTTGCTTCACTGATGATGGGTGTTGGAGCTGTTAAGAAAGACATCAGTGCCATGCTTCTTGCTGGTTTTGCTGGATTAGTTGCTGGGGCTTGTAGCATGGCAATTGGAGAGTTTGTCTCTGTGTATACTCAATATGACATAGAGATGACTCAGCTTAAAAGAGAGAGGGAAGATAACAACAATAGAGGAGTGGATGGAGAAGTTGAAAGGGAGAAGCTTCCAAACCCATTTCAGGCTGCACTAGCATCAGCACTGGCATTTTCTGTAGGTGCTTTGGTGCCAATGTTAGCAGCTGTGTTTATAAGGAATCACAAGATTAGAATGGGAGTTGTTGCTGCTGCTGCTAGCTTGGCATTGTTGGTGTTTGGAGGTGTAGGAGCAGTTCTTGGAAAAACTCCAGTGATGAGGTCTTGTATTAGGGTTCTAATTGGAGGTTGGATGGCTATGGCCATAACATTTGGCCTCACCAAATTGATTGGCTCTGCTGAACTTTGA 675 0.4533 MANPGARTNGISTNHVEIPIHSNGVELKPIQEVAESSIDYSQRAQWLRAAVLGANDGLVSVASLMMGVGAVKKDISAMLLAGFAGLVAGACSMAIGEFVSVYTQYDIEMTQLKREREDNNNRGVDGEVEREKLPNPFQAALASALAFSVGALVPMLAAVFIRNHKIRMGVVAAAASLALLVFGGVGAVLGKTPVMRSCIRVLIGGWMAMAITFGLTKLIGSAEL 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01575 224 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 31 219 IPR008217 GO:0005384|GO:0030026
Pumo6g01575 224 Coils Coil 102 122 - -
Pumo6g01575 224 Pfam VIT family 129 216 IPR008217 GO:0005384|GO:0030026
Pumo6g01575 224 Pfam VIT family 47 122 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01575 Pumo-Chr6 22939107 22939840 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01575 35 221 Nodulin-like Gene Family AT3G43660 68.449 2.69e-93 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01575 K22736 - gmx:100790996 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01575 6 22939107 22939840 Pumo6g01575 6 22939107 22939840 ECH