Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01573 ATGGCTACTGCCAAACCCTGTGGTTCGGTGCCACTTAGCCATGCAGAAGCAGCACTTCCAAGTCCAGCAAACAAAATTGATCAGAAACAAACCACTGAAGATCATGCCAGCATTGACTATTTACAAAGGGCACAGTGGCTTCGTGCAGCGGTTTTAGGAGCCAATGATGGGTTGGTTTCGGTTTCGTCGTTGATGATGGGTGTAGGAGCTGTTAAAAGAGATGAAAAGGCTATGCTACTTGCTGGTTTTGCAGGATTAGTTGCAGGGACTTGTGGCATGGCAATAGGAGAGTTTGTTGCTGTGTACACTCAGTATGAAGTTGAGGTAGGTCAAATGAAGAGAGAGATGAATATTGAGAGTGTGGGAGAGGAGAAGGACTTGGAGATGGAGATGGAGATGGAGAAAAGAGCATTGCCTAATCCATTGCAAGCTACTTTGGCTTCTGCAGTGTCCTTTTCTATAGGTGCTTTGGTGCCTCTACTTTCAGCTGCTTTCATAGAAAATTACAGGACAAGGGTTATTGTGGTTGTGGCAATGGCTAGCTTGGCTTTGGTGGTCTTTGGAAGGGTGGTGGCTCAACTGGGAAAAACTCCTAAAATCAAATCTTGTGTAAGGTTCCTCCTTGGAGGATGGATAGCCATGGCTATCACTTTTGGGTTAACCAAATTACTTGGTGCTAAAGCTTTAGATAATGAATAA 699 0.4464 MATAKPCGSVPLSHAEAALPSPANKIDQKQTTEDHASIDYLQRAQWLRAAVLGANDGLVSVSSLMMGVGAVKRDEKAMLLAGFAGLVAGTCGMAIGEFVAVYTQYEVEVGQMKREMNIESVGEEKDLEMEMEMEKRALPNPLQATLASAVSFSIGALVPLLSAAFIENYRTRVIVVVAMASLALVVFGRVVAQLGKTPKIKSCVRFLLGGWIAMAITFGLTKLLGAKALDNE 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01573 232 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 27 224 IPR008217 GO:0005384|GO:0030026
Pumo6g01573 232 Pfam VIT family 47 120 IPR008217 GO:0005384|GO:0030026
Pumo6g01573 232 Pfam VIT family 128 221 IPR008217 GO:0005384|GO:0030026
Pumo6g01573 232 CDD Nodulin-21 45 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01573 Pumo-Chr6 22919706 22920404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01573 19 229 Nodulin-like Gene Family AT3G43660 56.872 2.66e-81 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01573 K22736 - gmx:100803012 361.688