Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01572 ATGGCTAATGCTACACCCAGTGGTTCGGTGCCACACAACAACCATGTAGGAGCAGGAGTACTTCCAATTCCAATTCCCGCAAACAAAATTGATGATCAGAGGCAAACCCTAGCCACCGAAGATCACACCAGCATTGACTATTTGCAAAGGGCACAGTGGCTTCGTGCAGCGGTTTTAGGAGCCAACGATGGGTTGGTTTCGGTTTCGTCGTTGATGATGGGTGTAGGAGCTGTTAAAAGAGATGAAAAGGCTATGCTACTTGCTGGTTTTGCAGGGTTAGTTGCAGGGGCTTGTGGCATGGCAATAGGAGAGTTTGTTGCTGTGAACACTCAGTATGACGTTGAGGTAGGTCAAATGAAGAGAGACATCATGAACATGAGTGTGGGAGGGGATAAGGACTTGGAGATGGAGTTGGAGATGGAGAAGAGAGCATTGCCTAATCCATGGAAGGCTACTTTGGCATCTGCAGTGTCCTTTTCTGTTGGTGCATTGGTGCCTCTACTTTCAGCTGTTTTCATAGCTGATTACAGAACTAGGGTTATTGTTGTTGTGGCAATGGCTAGTTTGGCTTCGGTGGTGTTTGGAAGGGTGGGGGCTCATCTGGGAAAAACTCCTAAGGTAAAATCTTGTGTGAGGTTCCTTCTTGGAGGGTGGATAGCCATGTCCATCACTTTTGGGTTAACTAAATTAATGGGTGCTAGTGCTTTAGATTAA 714 0.4664 MANATPSGSVPHNNHVGAGVLPIPIPANKIDDQRQTLATEDHTSIDYLQRAQWLRAAVLGANDGLVSVSSLMMGVGAVKRDEKAMLLAGFAGLVAGACGMAIGEFVAVNTQYDVEVGQMKRDIMNMSVGGDKDLEMELEMEKRALPNPWKATLASAVSFSVGALVPLLSAVFIADYRTRVIVVVAMASLASVVFGRVGAHLGKTPKVKSCVRFLLGGWIAMSITFGLTKLMGASALD 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01572 237 Coils Coil 236 237 - -
Pumo6g01572 237 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 36 231 IPR008217 GO:0005384|GO:0030026
Pumo6g01572 237 CDD Nodulin-21 52 206 - -
Pumo6g01572 237 Pfam VIT family 135 228 IPR008217 GO:0005384|GO:0030026
Pumo6g01572 237 Pfam VIT family 54 121 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01572 Pumo-Chr6 22912975 22913688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01572 40 236 Nodulin-like Gene Family AT3G43660 58.883 5.61e-78 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01572 K22736 - gmx:100791523 339.347