Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01569 ATGAAATATACATGGAAAGTAGTGCAAGAGTTGAAACCTGCCTTACTGATGGCGCTGACGCAGGTTGCATATGCTTCTGCGAATGTGCTTTACAAGCTCGCCATAAATGATGGAATGAGCATTAGCGTAGTCACTGCATATCGTCACATCTTCGGAGCTGCTTTCTCTCTTTCTCTTGCTCTTATTTTCGAAAGAAAGAACAGGCCAAAGTTGACATGGAGGGTACTCTTTATGTCATTTTTTTGCGGTCTATTTGGAGGGAGTTTAGCACAAAACCTTTATTTCATTGGCTTGGCTTGGGTATCAGCGACATTTGCTACCTCCATTTATAATCTCGTTCCTGTGATCACCTTTATCTTCTCCGTTTTGTGCCGCTTTGAGAAGTTAAATTTGAGAACAGCAGCAGGGAGGGTCAAGGTGTTGGGAACGATAATAGGAATTAGTGGGTCAATGCTGCTGACATTTTTCAAAGGGGCAGAGATAAACATTTGGACCTTTCACATTAATCTTTTGCATAAAAATCAAAATGGTCACATAGGAACATCGCATGCTGACTCTGAAAGAAAATGGCTAGGTGTTTTATGCGGTCTTGCAAGTGGCTTCAGTTTTTCATTATGGCTCGTCATTCAGACTAAGATGGGTAAAGAATATCCAAGCCATCACTCAAGTACAGCATTGATGACCTTAATGGGGGCTATACAAGCCACAGTCTTTGCCCTGTGTGTTGAGAAGGATTGGAGCCAATGGAAGTTGGGTTGGAGTATTAGGCTTCTAACTGTGGCTTTTTCGGGAATTGTGGTCTCTGGATTAGTAGTTATTGTCACTAGTTGGTGTGTACGGCTGAGAGGTCCATTGTATGCATCTGTTTTCAACCCTCTCTCGCTTGTGATAGTGGCTATTTTTGCTTCGTTGGTGTTGGATGAAAACCTATATGTAGGAAGTGTAATTGGAGCAGTGCTAATTGTGTGTGGCTTGTACATGGTGCTGTGGGGTAAAAGCAAAGAAATGAGAATGGCCTCTCACTTGGCGTCATCAGACAACACCAAAAATTTTGAAGGGACTGTGGGTGTTGTAATTACGACAATGGATCATGACAATAGTGACTGCTGCAACAATAGCCACACAACAAGTAGTAATACCGATGTTGTTAGAATGGTTCAGAATGAATCTTCGTGA 1176 0.4218 MKYTWKVVQELKPALLMALTQVAYASANVLYKLAINDGMSISVVTAYRHIFGAAFSLSLALIFERKNRPKLTWRVLFMSFFCGLFGGSLAQNLYFIGLAWVSATFATSIYNLVPVITFIFSVLCRFEKLNLRTAAGRVKVLGTIIGISGSMLLTFFKGAEINIWTFHINLLHKNQNGHIGTSHADSERKWLGVLCGLASGFSFSLWLVIQTKMGKEYPSHHSSTALMTLMGAIQATVFALCVEKDWSQWKLGWSIRLLTVAFSGIVVSGLVVIVTSWCVRLRGPLYASVFNPLSLVIVAIFASLVLDENLYVGSVIGAVLIVCGLYMVLWGKSKEMRMASHLASSDNTKNFEGTVGVVITTMDHDNSDCCNNSHTTSSNTDVVRMVQNESS 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01569 391 PANTHER WAT1-RELATED PROTEIN 12 344 IPR030184 GO:0016020|GO:0022857
Pumo6g01569 391 Pfam EamA-like transporter family 12 147 IPR000620 GO:0016020
Pumo6g01569 391 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Pumo6g01569 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 334 - -
Pumo6g01569 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01569 Pumo-Chr6 22872939 22875395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01569 11 352 Nodulin-like Gene Family AT1G25270 41.908 6.31e-97 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01569 - - var:108326689 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01569 6 22872939 22875395 Pumo6g01569 6 22872939 22875395 ECH
Pumo2g01133 2 16577398 16582917 Pumo6g01569 6 22872939 22875395 PCT