Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01537 ATGATCATGGCTACCATTTCTTCAACTTGGTACTTGTATCTTCCCATAATTTTATCGTTATGCCCCATAACACTATGTGGAACAGTGCTAGAAGACCTCAAAATCTTACATCAACCACCAGATTTTAACTCCACAATTTTCTCCAACTGTCTCAAGAACCCCTCTCTTAGGTACTGCAGTTCCTCTCCCATGATGGACCTTGATGAAATATTCAAATTCACTATTGTTGCAAGCCATCTCTGCAATGAATCAAGGAACCCCAATTGCGTGGAGTCATTCCCCAAAGTTGATCTTAGAAACCACCCCAATATTGCACCTCTTTATTTGTCCTTTGATTTCTTTTGGAAGTATTGCCCCTTAAGCATTATGTCCATTGATTTATCCAACAATTCTATGAAGGGTAGTTTTCCAATTGATGTTCTCTATTGCACCCAAATTCAGTCTCTTGATCTAAGTACCAATGCATTTTCTGGTGACATTCCAATTCAAAGTTTCTCTCCCTTGACCAACCTCACTTTTCTCAATCTCTCATATAATTGCTTTTCAGAGAGTAAACTCTCTGATTCCCAATTCTTCAAAAGGTTTAACTCTTCTAGTTTTCTTCATTCTGGTGCTCTTTTGGATCAAAATAGGTTTACAGTAAAGGCTGTTTTTCTATTGGTTGGCTTTCCCATCCTTGTCATTTTGATGGTAATTTACTTGGTATGGCTTTGTTTCCAAAGGCCTGATTTTCTACCAAGTAAACTTCAAAGAAATAGGAGGTTTACACCAGCAATACTAAAGGCAGCAACTGATGGTTTTTCAAATAAGTGTTTGGTGGGGAAGAGTGATGTTGTTTACATCTACAAAGGGATCTTGAGAGATGGCACTGAAGTGAAAATTGAGATGTACTGGGATGATATACCAAGGGATTGTTACCGTAAATTTGTTGAAGAATGTAAAATTCTGTCTAAGTTAGACCACAAGAACCTTGTTAGAGTTCTGGGGTGGTGTAGGAGCAGAAAATTCAGGGCCGTTATAACTGAATGGACAAGAGAAGAAAATGTTGAAATGTGGTTATCCGGGTCAGGTCCACCATGGAATCATAGATTGAAGGTGTTAATGGGAGTTGTTGAATCCATGCGTTATCTGCAGGAGGAATGGCCTGAAGTTGACTATGAACTCAACACAAGTAGTATTTTATTGTCTGACAATATGGAACCATTAATTTTGAGGTTCAAAGTTGGAGATCAAAACAGCAATCAAAGAAAGATATACATGTTTGGAGTATTCCTTCTAGAGGTGATACTAAACAAGAAGGTTCAAGAGGAGTTTGATGGAGGTGATGCTAGATTTACTAGGTACATGAGAACCCTTAATCCTGAAGATTTGCAGCAGATGATTGATGAGAGAATGGAAGTAACTGAAACAAATTTTCATCAAGTTAAACAGGCTCTATCTCTAGGATTAATGTGCATAGACCAATCAAACAATGATCAACCAAGCTTGGGCCTGATAGTTAACACTATAGCAAGAGCCTACAAGGCTAGCCTTGTATCTGCAAATCATAGAATATTTCACGGGGAGAAATTTAAGGGACACATGCATGTTCAAACCTGA 1599 0.3821 MIMATISSTWYLYLPIILSLCPITLCGTVLEDLKILHQPPDFNSTIFSNCLKNPSLRYCSSSPMMDLDEIFKFTIVASHLCNESRNPNCVESFPKVDLRNHPNIAPLYLSFDFFWKYCPLSIMSIDLSNNSMKGSFPIDVLYCTQIQSLDLSTNAFSGDIPIQSFSPLTNLTFLNLSYNCFSESKLSDSQFFKRFNSSSFLHSGALLDQNRFTVKAVFLLVGFPILVILMVIYLVWLCFQRPDFLPSKLQRNRRFTPAILKAATDGFSNKCLVGKSDVVYIYKGILRDGTEVKIEMYWDDIPRDCYRKFVEECKILSKLDHKNLVRVLGWCRSRKFRAVITEWTREENVEMWLSGSGPPWNHRLKVLMGVVESMRYLQEEWPEVDYELNTSSILLSDNMEPLILRFKVGDQNSNQRKIYMFGVFLLEVILNKKVQEEFDGGDARFTRYMRTLNPEDLQQMIDERMEVTETNFHQVKQALSLGLMCIDQSNNDQPSLGLIVNTIARAYKASLVSANHRIFHGEKFKGHMHVQT 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01537 532 Gene3D Transferase(Phosphotransferase) domain 1 408 505 - -
Pumo6g01537 532 Pfam Protein tyrosine and serine/threonine kinase 278 398 IPR001245 GO:0004672|GO:0006468
Pumo6g01537 532 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 103 195 - -
Pumo6g01537 532 ProSiteProfiles Protein kinase domain profile. 267 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01537 532 SUPERFAMILY Protein kinase-like (PK-like) 245 503 IPR011009 -
Pumo6g01537 532 SUPERFAMILY L domain-like 84 229 - -
Pumo6g01537 532 Gene3D Ribonuclease Inhibitor 42 211 IPR032675 -
Pumo6g01537 532 Gene3D Phosphorylase Kinase; domain 1 242 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01537 Pumo-Chr6 22021653 22023364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01537 124 503 Receptor kinase-like Gene Family AT5G45780 22.921 4.71e-25 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pumo6g01537 PK_Tyr_Ser-Thr 1.5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01537 - - gmx:100779045 951.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01537 6 22021653 22023364 Pumo6g01537 6 22021653 22023364 ECH