Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01518 ATGCGGGGCGGCACATGGACGCGCAAGGCAGCGAGGGTATCGTGCGAGGAGGTCACGTGTGGTCGCACGGGGGTCGTGTGGGGTCGTGCGGCGGCGCACGGGGGGTTGCGCGGGCGTTGTGAGGGGTCGTGCGGGTGGCGTGAGGTGGTGCGGCGTGGCCCAACGCCCCTCAGATCTCATCGGCGGCGTTGCTTAGTACAGGGGAGTGGGAAGTCTGAGGGGAAGGGGGCCAATTCTAACTCGCATAAAAGAAAGTCTACTATGATTAGTGATGGACATCCTTCTGCATTTAAGAAGCCAGAGGATAACTTTACTACAGAAGACAATTATAATGAGAATGAGGATAAGAATGATGTTGGTGATTATGAGAATGAGGATAAGAATGATGTTGGTGATAATGTGAATGGGGATAAGAATGATGTTGGTGACAACACGGATGCAGAAAAAGCAGATGATGATGCAGTGGATGACCATCAAGAGGAAGAAGAGTACTTACCAGAGGATGATGGTCCAACTGCTACAGAGGAGCAACCTCACAAGGGTCTGGTCACAAAAGATGCAGATGAAAAGAATAAGCCTTCTACTCGACATTTCATCCATGGATATCACTTGATCCAAGGACAGATGAACCATGGAATGGAAGACTATATTTTTGCTCAACACAGGAATCTCGATGGTTATGACTTAGGGTTGTATGCAATATTTGATGGTCACACCGGTCATGAAGTTGCAAAGTACTTGCAAGGCCATCTATTCGAAAATATACTGAATGAGCCTGATTTCTGGGAAAATCCAGTGCATGCTGTTAAGAAAGCATGCAAAGATACAGATGATGAGATTTTAGAAAACATAGTTGATTCACGTGGAGGATCAACAGCTGTTGCAGCAATACTAATTAATGGAGTAAAGCTACTGGTAGCCAATGTTGGTGATTCTCGAGCACTATCATGCAAAAATGGTCGAGCAAAACCACTTACTGTGGATCATGAACCAGAGAAGGAAAAAGATCTTATTGAGAGCAGAGGAGGTTTTGTGTCTAAGAAACCAGGGAATGTTCCAAGAGTGGATGGCCAATTAGCAATGACACGAGCATTTGGAGATGGAAAACTGAAGGAGCACATTACGGCAGAACCAGATGTGATGATTCGGAAGATTGATGAAGACACTGAATTCATCATTTTGGCAAGTGATGGTCTGTGGAAGGTGATGACAAATCAGGAGGCTTGTGACTGTATCAGGGATGTGGATGATGCGCAGAAAGCATCCAAGAAGTTAGTTAAAGAAGCTAAATCTATGGGAAGCTATGATGATATTTCATGCATAGTTATTATGTTCTAG 1338 0.4529 MRGGTWTRKAARVSCEEVTCGRTGVVWGRAAAHGGLRGRCEGSCGWREVVRRGPTPLRSHRRRCLVQGSGKSEGKGANSNSHKRKSTMISDGHPSAFKKPEDNFTTEDNYNENEDKNDVGDYENEDKNDVGDNVNGDKNDVGDNTDAEKADDDAVDDHQEEEEYLPEDDGPTATEEQPHKGLVTKDADEKNKPSTRHFIHGYHLIQGQMNHGMEDYIFAQHRNLDGYDLGLYAIFDGHTGHEVAKYLQGHLFENILNEPDFWENPVHAVKKACKDTDDEILENIVDSRGGSTAVAAILINGVKLLVANVGDSRALSCKNGRAKPLTVDHEPEKEKDLIESRGGFVSKKPGNVPRVDGQLAMTRAFGDGKLKEHITAEPDVMIRKIDEDTEFIILASDGLWKVMTNQEACDCIRDVDDAQKASKKLVKEAKSMGSYDDISCIVIMF 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01518 445 Pfam Protein phosphatase 2C 211 438 IPR001932 -
Pumo6g01518 445 Gene3D - 197 445 IPR036457 -
Pumo6g01518 445 SMART PP2C_4 189 443 IPR001932 -
Pumo6g01518 445 SUPERFAMILY PP2C-like 196 445 IPR036457 -
Pumo6g01518 445 MobiDBLite consensus disorder prediction 59 194 - -
Pumo6g01518 445 MobiDBLite consensus disorder prediction 95 145 - -
Pumo6g01518 445 MobiDBLite consensus disorder prediction 172 194 - -
Pumo6g01518 445 FunFam Probable protein phosphatase 2C 39 191 445 - -
Pumo6g01518 445 ProSiteProfiles PPM-type phosphatase domain profile. 199 445 IPR001932 -
Pumo6g01518 445 PANTHER PROTEIN PHOSPHATASE 148 443 IPR015655 GO:0004722|GO:0006470
Pumo6g01518 445 MobiDBLite consensus disorder prediction 146 170 - -
Pumo6g01518 445 CDD PP2Cc 198 443 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01518 Pumo-Chr6 21012154 21018860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01518 196 445 PP2C-type Phosphatase Gene Family AT3G15260 59.363 1.82e-103 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01518 - - gmx:100814772 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01518 6 21012154 21018860 Pumo6g01518 6 21012154 21018860 ECH