Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01476 ATGCAGACTCAGGAATATTTTCTCCCGGATAATATGGTACTTCCTTTGGCAGATGAGGCCATTGATGCTCATATGCATGCTCCACATGCTTCTGCCTTTGATGCATTTTTACCTCCAGGTGTGAGGCAGATAACACCCTTTGACAGATTTAAATTGCAACCCTCCGAGGCTTGCCCCAAGAACTTTGTTATCTTTGATCAAACAGATCAACGAAGCAGGATTATGTTCCATCCTGCAATGACCTACCAATTTGACAGTCCTGGCTTAAATGTTCATGGTACTGGTTCTCAAGATTTTGAGAAGAATAAAGTCAATCAAATGGAAAGAGAATTGTCATCTCCTTTTGAAGAAGATCCTAATGACATCGATGCATTGTTGAGCATAGGAGCGGATGAACTAGAAGACTTTGACGAGGAAGAAGTCAGCACGGCAAGGACTCATGAAAATTATGAAAGTTTATCTGATACTTGCTCCAGTTATTGCTCAAAATCAAGGAAGAAGAGGTCATCATCATCTTCTATACAGAAGTCTTCTGGGGCTGGGGGTTACTGCCACAACGAAGGGAAACACCAGGAGATGAAGAGGATGGTGAGGATATTGAGAAAGATTGTGCCTGGTGGAGGTAATCAAATGGATACTGTTGCTGTTTTAGATGACGCTGTTAAATACCTCAAGTCTCTCAAAGTTGAGGTTGAACAATTCGGGGTTGAACCATGA 717 0.4198 MQTQEYFLPDNMVLPLADEAIDAHMHAPHASAFDAFLPPGVRQITPFDRFKLQPSEACPKNFVIFDQTDQRSRIMFHPAMTYQFDSPGLNVHGTGSQDFEKNKVNQMERELSSPFEEDPNDIDALLSIGADELEDFDEEEVSTARTHENYESLSDTCSSYCSKSRKKRSSSSSIQKSSGAGGYCHNEGKHQEMKRMVRILRKIVPGGGNQMDTVAVLDDAVKYLKSLKVEVEQFGVEP 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01476 238 PANTHER TRANSCRIPTION FACTOR BHLH145 29 237 IPR037546 -
Pumo6g01476 238 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 191 234 IPR036638 GO:0046983
Pumo6g01476 238 Gene3D - 189 235 IPR036638 GO:0046983
Pumo6g01476 238 MobiDBLite consensus disorder prediction 161 180 - -
Pumo6g01476 238 MobiDBLite consensus disorder prediction 161 187 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01476 8 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 39.764 5.01e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01476 - - gmx:100791998 406.757