Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01472 ATGTCAATGGCTGCGACTCTCACTGTTGTAAGAATTCCCACTTTCCACACTCAACAACGCCATCTCAAAAGACACTTCACTGCACTCTCTTCCTTACGCCTCCTCAATTTCGCAAAGATGGAAGGAAGTGAAATCAGTGAGCAAGTAGGGGAGGATTTGAGAGCAAAGAAGAAAATATTTGTTGCTGGAGCCACTGGTAGCACTGGCAAAAGAATCGTTGAGCAGTTACTGGCAAAGGGTTTTGCTGTTAAGGCTGGTGTAAGAGACGTGGACAAGGCCAGGACCACCCTTTCCTCTGCCAACCCATCTCTTCAAATTGTGAAAGCTGATGTCACAGAGGGGTCTGATAAGCTAGCTGAGGCCATTGGTGATGATTCAGAAGCAGTAGTATGTGCCACAGGCTTTCGCCCTGGGTGGGATTTGCTTGCTCCATGGAAGGTTGACAATTTTGGCACGGTAAACCTTGTTGAAGCATGCAGGAAACGTAATGTTAACAGATTCATTCTTATCAGTTCCATTTTAGTTAATGGAGCTGCTATGGGACAGCTACTCAATCCAGCTTACATCTTTCTTAATGTTTTTGGACTCACCTTGGTAGCAAAACTACAGGCAGAGAAATATATCAGGAAATCTGGTATAAACTACACAATAATAAGACCCGGCGGGTTGAGAAACGATCCTCCTACTGGAAATATTGTTATGGAGCCAGAGGACACCCTTTATGAAGGTTCCATATCCAGAGATCTAGTTGCTGAAGTGGCTGTGGAGGCATTGGCTTATCCTGAGGCATCTTATAAAGTTGTGGAAATAGTGTCTCGCCCTGATGCTCCTAAGCGCTCATACCATGACCTTTTTGGTTCCATAAGTCAACGATGA 876 0.4486 MSMAATLTVVRIPTFHTQQRHLKRHFTALSSLRLLNFAKMEGSEISEQVGEDLRAKKKIFVAGATGSTGKRIVEQLLAKGFAVKAGVRDVDKARTTLSSANPSLQIVKADVTEGSDKLAEAIGDDSEAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKRNVNRFILISSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAEKYIRKSGINYTIIRPGGLRNDPPTGNIVMEPEDTLYEGSISRDLVAEVAVEALAYPEASYKVVEIVSRPDAPKRSYHDLFGSISQR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01472 291 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 57 272 IPR036291 -
Pumo6g01472 291 CDD SDR_a5 58 273 - -
Pumo6g01472 291 PANTHER FLAVIN REDUCTASE-RELATED 52 289 - -
Pumo6g01472 291 Pfam NAD(P)H-binding 63 260 IPR016040 -
Pumo6g01472 291 Gene3D - 43 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01472 Pumo-Chr6 20225106 20232538 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01472 56 188 Monolignol Biosynthesis Gene Families AT2G33590 33.099 1.31e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01472 - - gmx:100812074 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01472 6 20225106 20232538 Pumo6g01472 6 20225106 20232538 ECH