Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01434 ATGGTGAAGGGACGCCAAGGAGAGCGCGTCAGACTCTACGTGAGGGGTACAATCCTTGGATACAAAAGGTCCAAGTCAAACCAGTATCCAAACACATCCCTGATCCAAATTGAGGGAGTGAACACCAAAGAAGAAGTAGGATGGTATGCTGGCAAGAAAATGGCCTATATCTACAAGGCTAAGGTGAAGAAGAATGGAAGCCATTACCGCTGCATATGGGGCAAGGTTACAAGGCCTCACTGGCAACAGCGGTATTGTTCGTGCAAAATTCAAGTCAAACCTTCCACCCAGATCAATGGGAGCACGAGTAAGAGTATTCATGTACCCAAGTAA 333 0.4685 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVGWYAGKKMAYIYKAKVKKNGSHYRCIWGKVTRPHWQQRYCSCKIQVKPSTQINGSTSKSIHVPK 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01434 110 Pfam Ribosomal protein L35Ae 12 93 IPR001780 GO:0003735|GO:0005840|GO:0006412
Pumo6g01434 110 PANTHER 60S RIBOSOMAL PROTEIN L35A 2 91 IPR001780 GO:0003735|GO:0005840|GO:0006412
Pumo6g01434 110 Gene3D translation elongation factor selb, chain A, domain 4 6 108 IPR038661 -
Pumo6g01434 110 SUPERFAMILY Translation proteins 12 89 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01434 Pumo-Chr6 19566700 19569114 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01434 1 80 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 92.500 1.72e-51 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01434 K02917 - gmx:100305958 168.703