Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo6g01421 | ATGGCAGCAGAAACTCCCTCTCAGTCTCCCACACCCTCCTTTAGTGATGATGGCCAAGTTGGTGGCTTCGATTGGATGGTCCTTGTGGCAGCAATTTTATGTGCCTTTGTGTGTGCTCTTGGCCTCAACACAATGTTACAATGTGTGTTTCAATGTGCTTGCCGTGTCCTCACTGAGCCTCGCCAATGGATTGCTTCACGCAGGCTCAATTCTGGCCTCAAGAGAAAGGAAATGGTGGCTTTGCCAACCTCAACTTACACACACTCTGATGCCTCCTCTTCTCCATCTTCTTCTTCACCTTCTAATAATTGTGTCATTTGCTTGGCTGAGTTCTCTGATGGGGACCCTATAAGGTTCCTTCCAAAGTGCAACCACTACTTCCATGTGGCACCTCCTCAAGTCAAATGA | 408 | 0.4804 | MAAETPSQSPTPSFSDDGQVGGFDWMVLVAAILCAFVCALGLNTMLQCVFQCACRVLTEPRQWIASRRLNSGLKRKEMVALPTSTYTHSDASSSPSSSSPSNNCVICLAEFSDGDPIRFLPKCNHYFHVAPPQVK | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo6g01421 | 135 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 18 | 130 | - | - | |
| Pumo6g01421 | 135 | Pfam | RING-like zinc finger | 103 | 129 | IPR001841 | - | |
| Pumo6g01421 | 135 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 60 | 130 | IPR013083 | - | |
| Pumo6g01421 | 135 | SUPERFAMILY | RING/U-box | 103 | 129 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pumo6g01421 | Pumo-Chr6 | 19446406 | 19446863 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pumo6g01421 | 7 | 129 | C3H Transcription Factor Family | AT2G17450 | 34.646 | 1.72e-20 | 80.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo6g01421 | - | - | gmx:100779286 | 207.994 |