Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01374 ATGGCAAACCTCAAAACCAACTGTGTAACCTCTTTCCTTATCCTATTATCGCTCCAACACTACTCCATCGCTCTCCACGTTACTTCCTACACCCCACTAGATAATTTCCGCATCAACTGCGGTTCCATAAAGTCACAAACTTCCTCAGATAATCGAAACTGGACCGCAGACAGTACTAACTCCAAACTACTCTCAACCGTTGAAGCTCAAAACCCTTCACTCAACACAGTCCCTTACAGCACCACGCGCTTGTCACGCTCCGAATTCTCCTACTCCTTCTCCGTCACCAAAGGTCCAAAGCTTCTTCGCCTTTACTTCTACCCTTCTTCATACCCTGGTTTTCATCGTCACCACTCTCTCTTCTCCGTCAAAGCTAACCACCACACCCTTTTAAAAAACTTCAACGCTTCACTCCAAGCAGACAACGTTAACGAGACGGAACCCGCAGGAACATTCACAAAAGAATACTACATCAACGTGGAAACCAGCCACCACTTAAACATAACCTTCACACCTAGCTCCACCACTCACCCCAAAGCCTACGCGTTCATCAATGGCATCGAGGTCATATCCATGCCAAACGACCTTTATCAAGCACTCATCAGTGGTACAAATAAAAACACTGCTTTGAAGACAGTGTACAGAATCAACGTTGGAGCAAACAAAAACGACGTCATCTTAACCAACAACAACAACCTCGGAAGCACTTCCGATCCATCACAACCTCCAAAACCACCCAAAGTACCTCCCAAACCATCAAACAACAAACCCATGAAAATTCCAATAATAGCCTCTGCGGTGGCCGCGTTGTTGTTTCTGTTATCATTCACCATCGGATACTTAATCTTCCGATACGTAAGAAGAGTTGCTGCTGAGAAGGGAGACACAAACCCGGAACCTTCAAGCACGCGCTGCCGCGACTTTTCCATCGCGGAGATAATCGCCGCCACCAACAACTTCGACGAGGGTTTAATCGTGGGCAAAGGAGGGTTCGGGAACGTGTACAAGGGCCACATCGACACGTGTCAGAAACCCGTGGCCATCAAGCGCCTCAAACCGGGTTCGGACCAGGGCGTGCACGAGTTCCAGACCGAGATCAAGATGCTCTCGCGGTTCCGCCACGCGCACTTGGTGTCACTTATAGGGTACTGCAACGACGGCGGAGAAATGATCCTCGTCTACGATTTCATGGCGCGTGGGACCCTCCGCGACCACTTGTACGGCTCCGACCAGGCCCTGACGTGGGAGAGGAGGCTGGATATCTGCCTGGAGGCGGCGCGTGGGCTTCACTTCCTCCACGCGGGCGTGGACCGGCAGAGCGTGATCCACCGCGACGTGAAGAGCACGAACATCCTGCTGGACGAAGATTGGGTGGCGAAGGTGTCGGATTTCGGGTTGTCGAAGGTGGGGCCCACTGCGTCCCACGTGACCACGGACGTGAAGGGTAGTTTCGGGTATTTGGACCCGGAGTACTACATGAGTCTTTGGCTGACTCAGAAATCCGACGTTTACTCCTTCGGCGTCGTTTTACTGGAGGTATTGAGTGGGAGGCCCCCCATCGGGAATAAGGTGGACAACAAGCACCAGCAGTTCTTGGTGACATGGGTCAAGAAATGTTTCAATGATGGGAATGTTGATCAGGCGGTGGATCCGGTTTTGAAGGGGACCATAGGGCCCAAGTGTTTGATGAAGTTTGTGGAGATTGCGTTGAGTTGTTTGAATGATCATGGGAAGCAACGGCCCATGATGAGCGATGTGGTGAAGGGGTTGGAGTATGCATTGCATTTGCAACGACGCTATGCCCAAGGTAAAGGGGGGGAAATTGGGTTGACCAAAATTGAGGATCGTGGTGGTGAGTCTGACCAGAAATTTGGGAAAGTGATGTCGATGAACGCGTCTAGCAGCAGCAAGGCTACCACAACATGCAGTGAACAGGAGCAAGCATTGGTGCATGGGATGTTCCCTGAGCTTGGAAATCAAAGACCACGGTAA 1992 0.5105 MANLKTNCVTSFLILLSLQHYSIALHVTSYTPLDNFRINCGSIKSQTSSDNRNWTADSTNSKLLSTVEAQNPSLNTVPYSTTRLSRSEFSYSFSVTKGPKLLRLYFYPSSYPGFHRHHSLFSVKANHHTLLKNFNASLQADNVNETEPAGTFTKEYYINVETSHHLNITFTPSSTTHPKAYAFINGIEVISMPNDLYQALISGTNKNTALKTVYRINVGANKNDVILTNNNNLGSTSDPSQPPKPPKVPPKPSNNKPMKIPIIASAVAALLFLLSFTIGYLIFRYVRRVAAEKGDTNPEPSSTRCRDFSIAEIIAATNNFDEGLIVGKGGFGNVYKGHIDTCQKPVAIKRLKPGSDQGVHEFQTEIKMLSRFRHAHLVSLIGYCNDGGEMILVYDFMARGTLRDHLYGSDQALTWERRLDICLEAARGLHFLHAGVDRQSVIHRDVKSTNILLDEDWVAKVSDFGLSKVGPTASHVTTDVKGSFGYLDPEYYMSLWLTQKSDVYSFGVVLLEVLSGRPPIGNKVDNKHQQFLVTWVKKCFNDGNVDQAVDPVLKGTIGPKCLMKFVEIALSCLNDHGKQRPMMSDVVKGLEYALHLQRRYAQGKGGEIGLTKIEDRGGESDQKFGKVMSMNASSSSKATTTCSEQEQALVHGMFPELGNQRPR 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01374 663 FunFam FERONIA receptor-like kinase 35 193 - -
Pumo6g01374 663 Gene3D Phosphorylase Kinase; domain 1 304 396 - -
Pumo6g01374 663 Pfam Protein tyrosine and serine/threonine kinase 326 589 IPR001245 GO:0004672|GO:0006468
Pumo6g01374 663 Gene3D Transferase(Phosphotransferase) domain 1 397 606 - -
Pumo6g01374 663 ProSitePatterns Protein kinases ATP-binding region signature. 326 349 IPR017441 GO:0005524
Pumo6g01374 663 ProSiteProfiles Protein kinase domain profile. 320 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01374 663 CDD STKc_IRAK 326 591 - -
Pumo6g01374 663 SUPERFAMILY Protein kinase-like (PK-like) 303 588 IPR011009 -
Pumo6g01374 663 FunFam Receptor-like protein kinase FERONIA 293 396 - -
Pumo6g01374 663 Pfam Malectin-like domain 38 225 IPR024788 -
Pumo6g01374 663 PANTHER OS07G0166700 PROTEIN 304 597 IPR045272 GO:0004714|GO:0006468
Pumo6g01374 663 MobiDBLite consensus disorder prediction 227 254 - -
Pumo6g01374 663 MobiDBLite consensus disorder prediction 239 254 - -
Pumo6g01374 663 Gene3D - 35 193 - -
Pumo6g01374 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Pumo6g01374 663 SMART serkin_6 320 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01374 663 FunFam Receptor-like protein kinase FERONIA 397 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01374 Pumo-Chr6 18531361 18533699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01374 89 623 Receptor kinase-like Gene Family AT3G51550 41.207 2.46e-122 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pumo6g01374 PK_Tyr_Ser-Thr 5.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01374 - - ccaj:109805163 853.973