Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01357 ATGGCTAATTTGCTCATGGATAATGATGATAATGTTCATATGAGGTTCTTATTCCTTACATCCATATTCTTCTTCTTCTTGATAGCATCCATTAGTGCCCAAGAAAACACCAAACATATAGAGTGTAGCAAGCCATACAACTGTGGACCAATATCCATCTACTACCCTTTCTGGGGAGGGAACAGACCCATTTATTGTGCCGGCAACAAGCAATTCAAGCTCAACTGCGAGGGTGATCAAAACACCACCATTCAACTTGGCTCACAAAGTTTCCAAATGCTTCACTTAGATGATCCAGTGCGCTACATCACCACAATGGTTCGAACAGGCCTAGTCTATGATCATTGTTCTTCCTCGGCCTTAACCAACACTTCCTTGGACTCAAGTCTATTTAGTTACTCGCCAAATGTTACCAACATCACCGTCTTCTATGGTTGTCCTAGTTCCGTGATTTCAAATAGCACACACTCTTTTCCATGCAAGGAAGATCGCAACAAGAGTGCTTTCTATGGAGACCCAGCAACTGTAAAAGTTCAAGATTGTGAAGGACCTAGGATTGAAGTGCAAGTAACACAGGAACATGTGCCTGATGGAGGAATTCAAGGGCTGAATAAAGCTTTGAATGAAGGGTTTGAAGTGCATCTTATTTCAGAGGGTCAAGCTAAACAGTGTTTAGGATGCGTTTTAACTAATGGATCATGTGGGGCTAATAATGAGTCTCAGTTTTCATGCTTTTGCCCGGATGGTACTGAAGGTTTAGATTGTTCTCCTAATCATAGTAATAAATGGAATTGGGAAAGGAAGCTCGGTATAGGCGTTGCTGCTGCTGCGCTCAGTGCAATTGTAGTTGGCATTGGCTTTTATATCTATTATAGTCGTCAAAAGAAGAAGAATAATCTTCGTGTAGTATCATCATCAGTACTATCTAAAGGAACCTCTTATAGTTCTTCTATAGAAGATACTGAGGAGGGTTGTACATACTTTGGAGTCCATTTCTTCACCTATAGTGAACTTGAAGAGGCCACCAACTACTTTGATCCTGCCAGAGAACTAGGAGATGGAGGATTTGGAACTGTGTATTTTGGCAAACTTCATGATGGACGTTTAGTTGCAGTGAAAAGAATGTACGAGAACAGCTACAAAAGAGTTGAGCAATTCGTGAACGAAGTAGACATCTTAACAGGCCTACACCACCAAAACCTTGTGTCCCTATACGGATGCACATCACGGCACAGCAGAGAGCTTCTTCTGGTATACGAGTACATCCCCAATGGAACCGTTGCTGATCACCTTCACGGCCAAAGAGCAAAACCGGGCACACTCACATGGCACATCAGAATGAGCATTGCCATAGAAACTGCTAGTGCACTGGTGTATCTCCACGCCTCAGACATCATCCACAGAGACGTGAAAACCAATAATCTTCTTCTTGACAACCACTTCAGTGTCAAGGTAGCGGATTTCGGCCTTTCGCGTCTCTTCCCAACCCATGCCACGCACGTTTCAACTGCGCCACAGGGGACTCCGGGTTATGTTGATCCAGAGTACAATGAGTACTACCAACTCACTGATAAGAGTGATGTTTATAGCTTTGGAGTTGTGCTGATTGAGCTTATATCGTCGATGCCCGCGGTTGATATCTCGAGGCGTAGGCATGAGATAAACCTGTCCAACATGGCCATCAAGAAGATCCAGAGTGGGGCGTTGCATGAGATAGTGGACCCTACTCTAGGGTTTGAGAGTGATTTCAAGGTGAGGAAAATGATCAGTGCTGTGGCTGAGTTGGCCTTTCAGTGCTTGCAGAGTTCCAAAGATGTGAGGCCCTCTATGGCAGAAGTGTTGGATAGGCTAGAGGATATTAGAAGTGATGGGAACTGTAAGAGCAAGCATGAGGTGCTGGATATAGCAGAAGATGATGCTGCTAATTTGCTCAAGAATGTGCCTCCTCCATCATCACCTGATTCAAATTTGGTGACTATTTCTACACCATCAAATGGTAGCTAG 2004 0.4386 MANLLMDNDDNVHMRFLFLTSIFFFFLIASISAQENTKHIECSKPYNCGPISIYYPFWGGNRPIYCAGNKQFKLNCEGDQNTTIQLGSQSFQMLHLDDPVRYITTMVRTGLVYDHCSSSALTNTSLDSSLFSYSPNVTNITVFYGCPSSVISNSTHSFPCKEDRNKSAFYGDPATVKVQDCEGPRIEVQVTQEHVPDGGIQGLNKALNEGFEVHLISEGQAKQCLGCVLTNGSCGANNESQFSCFCPDGTEGLDCSPNHSNKWNWERKLGIGVAAAALSAIVVGIGFYIYYSRQKKKNNLRVVSSSVLSKGTSYSSSIEDTEEGCTYFGVHFFTYSELEEATNYFDPARELGDGGFGTVYFGKLHDGRLVAVKRMYENSYKRVEQFVNEVDILTGLHHQNLVSLYGCTSRHSRELLLVYEYIPNGTVADHLHGQRAKPGTLTWHIRMSIAIETASALVYLHASDIIHRDVKTNNLLLDNHFSVKVADFGLSRLFPTHATHVSTAPQGTPGYVDPEYNEYYQLTDKSDVYSFGVVLIELISSMPAVDISRRRHEINLSNMAIKKIQSGALHEIVDPTLGFESDFKVRKMISAVAELAFQCLQSSKDVRPSMAEVLDRLEDIRSDGNCKSKHEVLDIAEDDAANLLKNVPPPSSPDSNLVTISTPSNGS 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01357 667 MobiDBLite consensus disorder prediction 648 667 - -
Pumo6g01357 667 Pfam Wall-associated receptor kinase galacturonan-binding 42 97 IPR025287 GO:0030247
Pumo6g01357 667 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Pumo6g01357 667 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 19 657 IPR044652 GO:0004672
Pumo6g01357 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Pumo6g01357 667 Pfam Wall-associated receptor kinase C-terminal 177 249 IPR032872 -
Pumo6g01357 667 ProSiteProfiles Protein kinase domain profile. 345 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01357 667 Gene3D Phosphorylase Kinase; domain 1 316 421 - -
Pumo6g01357 667 Pfam Protein kinase domain 348 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01357 667 MobiDBLite consensus disorder prediction 643 667 - -
Pumo6g01357 667 SMART serkin_6 345 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01357 667 Gene3D Transferase(Phosphotransferase) domain 1 422 633 - -
Pumo6g01357 667 SUPERFAMILY Protein kinase-like (PK-like) 322 618 IPR011009 -
Pumo6g01357 667 ProSitePatterns EGF-like domain signature 1. 244 255 IPR000742 -
Pumo6g01357 667 FunFam Wall-associated receptor kinase-like 20 422 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01357 Pumo-Chr6 18268644 18277427 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01357 35 654 Receptor kinase-like Gene Family AT1G25390 44.231 3.83e-150 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pumo6g01357 Pkinase 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01357 - - gmx:100794703 1119.76