Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01345 ATGAATCTTGCACATGTCACAAAGAAAACATATCAAGAGAAATGTCAGAGGTTTGGCAATCTTCTGAGGAAATCACTTCATTGCAAACCTGATTCATCAGAAGTTCATGATCCGAAGGCAATTAGAAGTACTCAGAGAAAAACACAAGGCAAGATTAACACTCAGAGACACTCAGAGAACCATGTTAGCCATGAAATTTTCCTTGATAGATCAAGCGGTGAGATTAAGATTTGTCCATGTTGTCCTTGTTCTCATCAAGGCAATGAAGATGGAAAAAGTGTACAAGAGCCTCATCCTCCTAGATCAACCAAGAGAATTACACCTTCATCAAAAACACACTGTGTTGATTGTGATGAATGTAATGTTTTATTCTCAAAGAAAAAGGTGCCGCTGAAGAAAGATTCTAATGATGATCTCCCAATATCAACTCGTCATCATGAATGTGAAGAGAAACTAAAATCTACTGACACTGTTGAAGAACATGATAATATCCCTGAACATTCAGTGATCCAACTTGAGAGAGAAGGTTCATCTTGCAAGATCATCAAACAAATATGCAAAGATAACTTGATCGAAAGCAGGGCAGCACAGATTGAATGTGTCCTGAGAGTCCAGAACAAGCAAGAAACATTTTCATGCTTTGAGGAAAGTAGGGAAATGGTAAGGACTAAAGCTGAAAGGTTACAAAATGAGCACCCAAGATGCTTGGTTGATGGAAATGAGCGATTGAGATTTCATGGTACAACAATTGCATGCTCCCTTGGTTTAAATGGCTCTTCTACCCTTTGCACTTTAGACCAATGTGGTGTGTGTCAAATTCTGAGGCATGGTTTCTCTGCCAACCAAGAATTTCATGGGGCACTTGGGGTTTACACCACTTCTACTAGTGGAAAAGCCATTGATTCCATTTGCTCATCCAATAAATCTGTCCAGAGAATGTGTGTTATGCTGTGCAGAGTAATTGCTGGGAGAATCCATAATCCTCTACAAGAGATCAAGGAAATGAATGATCCTGGGTTTGATTCTTTGGTAAAGAAAATAAGTGACCAATCAGAGATTGAAGAACTCGTTGTTTTAAATCCTAGAGCTGTGCTCCCTTGCTTTTTGGTAATCTACAATTTCTTAAAGTTGGATTCAACTAAAGATTAG 1149 0.3864 MNLAHVTKKTYQEKCQRFGNLLRKSLHCKPDSSEVHDPKAIRSTQRKTQGKINTQRHSENHVSHEIFLDRSSGEIKICPCCPCSHQGNEDGKSVQEPHPPRSTKRITPSSKTHCVDCDECNVLFSKKKVPLKKDSNDDLPISTRHHECEEKLKSTDTVEEHDNIPEHSVIQLEREGSSCKIIKQICKDNLIESRAAQIECVLRVQNKQETFSCFEESREMVRTKAERLQNEHPRCLVDGNERLRFHGTTIACSLGLNGSSTLCTLDQCGVCQILRHGFSANQEFHGALGVYTTSTSGKAIDSICSSNKSVQRMCVMLCRVIAGRIHNPLQEIKEMNDPGFDSLVKKISDQSEIEELVVLNPRAVLPCFLVIYNFLKLDSTKD 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01345 382 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 26 372 - -
Pumo6g01345 382 MobiDBLite consensus disorder prediction 29 60 - -
Pumo6g01345 382 MobiDBLite consensus disorder prediction 29 44 - -
Pumo6g01345 382 Gene3D - 160 374 - -
Pumo6g01345 382 SUPERFAMILY ADP-ribosylation 169 373 - -
Pumo6g01345 382 MobiDBLite consensus disorder prediction 89 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01345 Pumo-Chr6 18131541 18134504 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01345 146 371 C2H2 Transcription Factor Family AT5G54630 45.148 2.33e-67 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01345 - - gmx:102660699 642.884