Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01294 ATGGGTTTATCTTCTCTCTTTCTTGTTTTAATTCCTCTATTGACATCATCACTTGCTGTTTGCCAACTTGAAGAATTTGTTAGCATTGATTGTGGAGGGACAAGTAATTACACTGATAACAGCACGGGGTTGTCATGGATCTCAGACTCTGGGATCATGCAACATGGCATTTCAGTGGAAGTGGAAAGTCCAAATGGAAGCATGGTGCAGTATCAAAGAAGGAGAGACTTTCCCATAGACAGCAAGAAGTACTGTTACACACTGAGCACAGAAGAGAGAAGAAGATATTTGGTGAGAGCAACGTTTCAGTATGGAAGCTTGGACAGTGGAGACACTTACCCTCAGTTTCAGCTCTTCTTGGATGCAACCAAATGGGCCACTGTGTCAATATATGATGCCTCACGAATATATGTTAAGGAAATGATCATCAGGGCACCCTCAAATTCTATTGATGTCTGCATGTGCTGTGCTACAACTGGTTCTCCTTTCATTTCTACCCTTGAGTTGCGACCCTTGAATCTTTCAATGTATGCCACAGATTTTGAGGACAATTTCTTCTTAGAAGTTGCTGCAAGAATAAACTTTGGTGCTCCAACTGAGGATGCTGTCAGGTACCCGGATGACCCTTATGATAGAATCTGGGATTCTGATCTTATTAGAAGGCAAAATTATCTTGTTGGGGTGGCGCCAGGCACAGAAAGGATTAGCACAACAAGAAACATAGATATTGAGACAAGAGAATACCCACCTGTTAAAGTTATGCAAACTGCAGTTGTTGGCACGAAAGGAGTACTCAGCTACAGATTGAACCTTGAAGACTTTCCTGCCAATGCTCGAGCATATGCATATTTCGCAGAGATTGAAGATCTGGGGAAGGACGAGAGTCGAAAATTCAAATTAAAGCAACCTTATATAGCTGACTATAGCAATGCAGTGGTTAACATTGCTGAGAATGCCAATGGGAGCTACACTTTATATGAACCAAGTTACATGAATGTGACTCTGGAGTTTGTTTTATCATTCTCATTTGTTAAGACCCCGGATTCTACTCGAGGACCTCTTCTAAATGCATTGGAAATAAGTAAATATGTAGAGATTGCTTCACAAACAGACAAGCAAGACGCAACTGTTGTAAATGCATTTCAATTATTGTCTGCTCAAAGTTCCCAGACAAACGAAGGTGATCCTTGTGTTCCAACTCCATGGGAATGGGTGAATTGTAGTACCACCACGCCTCCAAGAATTACTAAAATAATTCTTTCGAGAAGGAATGTGACGGGTGAAATCCCACCTGAGCTTAGCAACATGGAAGCATTGACAGAGTTGTGGTTAGATGGCAACTTGCTTACTGGACCGTTTCCTGACATGAGCAAACTTATAAATCTAAAGATCGTGCATTTAGAGAACAACAAGTTGACAGGTCGACTACCACCTTATCTGGGTAGTTTGCCAAGCTTACAAGCACTGTTCATACAGAACAACTCATTTAGTGGGGAAATACCAGCCGGATTAATATCTAAAAAAATTGTTTTCAACTTTGATGGTAATCCTGGACTATATAGAGGAAACAAGAAGCATTTTAAGTTGGTTGTGGGAATTTCAATTGGAGTACTAGTGACTCTATTATTATTATTCTTAGTAAGTTTGGTGCTATTGCTTAATACACGGAGAAAGGCATCTCAAAAGAAACGTGAAGAAAAAGCAGGCATTTCTAGACGCACTAACAGTAAACCTTTAACTGGATACTCATTTCTTCGGGGTGGAAATTTAATGGATGAAAATACTACCTGCTATATTGCACTCTCGGAGTTGAAAGAAGCTACAGACAATTTTTCAAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTCTACTATGGCAAAATGAGAGATGGAAAAGAAATAGCAGTTAAAAGTATGAATGAATCATCTTGCCATGGGAACCAGCAATTTGTTAATGAGGTGGCCCTCCTATCCAGAATTCATCACAGAAATTTGGTTCCTTTGATTGGATATTGTGAAGAAGAATGTCAGCATATTCTGGTTTACGAGTATATGCACAATGGCACTTTACGGGATCACATTCATGAGAGTTCCAAGAAGAAGAACTTAGACTGGTTAGCTCGTCTTCGTATTGCAGAAGATGCTGCTAAAGGTCTTGAATACTTACACACAGGATGCAATCCTAGTATCATTCATCGTGATATAAAGACAGGCAATATTCTCCTAGACATCAATATGAGAGCAAAAGTATCAGACTTTGGACTCTCTAGATTGGCTGAAGAAGATTTAACCCATATATCAAGCATTGCACGAGGAACTGTAGGCTACTTGGATCCTGAGTACTATGCAAGTCAGCAATTGACAGAAAAGAGTGACGTGTATAGTTTTGGAGTTGTTTTGCTAGAACTGATATCTGGAAAAAAGCCTGTGTCTTCTGAAGATTATGGTGCTGAAATGAACATTGTTCACTGGGCAAGGTCCTTAACTCGTAAAGGAGATGCAATGAGCATCATTGAGCCTTCTCTAGCTGGGAATGCCAAAACTGAGTCCATTTGGAGGGTGGTTGAAATTGCCATGCAATGTGTAGAACAACATGGTGCCTCCAGGCCAAGGATGCAAGAAATCATTTTGGCTATCCAAGATGCTATCAAGATTGAAAAAGGAACAGAAAATAAGCTAAAATCATCATCATCATTTTCAGGTAGTAGTAGTTCAAAGCCACATTCTTCCCGAAAAACTTTACTCACAAGCTTTCTTGAAATTGAGAGCCCTGACGTGTCAAATGGTTGCCTTCCATCAGCAAGATAA 2808 0.4006 MGLSSLFLVLIPLLTSSLAVCQLEEFVSIDCGGTSNYTDNSTGLSWISDSGIMQHGISVEVESPNGSMVQYQRRRDFPIDSKKYCYTLSTEERRRYLVRATFQYGSLDSGDTYPQFQLFLDATKWATVSIYDASRIYVKEMIIRAPSNSIDVCMCCATTGSPFISTLELRPLNLSMYATDFEDNFFLEVAARINFGAPTEDAVRYPDDPYDRIWDSDLIRRQNYLVGVAPGTERISTTRNIDIETREYPPVKVMQTAVVGTKGVLSYRLNLEDFPANARAYAYFAEIEDLGKDESRKFKLKQPYIADYSNAVVNIAENANGSYTLYEPSYMNVTLEFVLSFSFVKTPDSTRGPLLNALEISKYVEIASQTDKQDATVVNAFQLLSAQSSQTNEGDPCVPTPWEWVNCSTTTPPRITKIILSRRNVTGEIPPELSNMEALTELWLDGNLLTGPFPDMSKLINLKIVHLENNKLTGRLPPYLGSLPSLQALFIQNNSFSGEIPAGLISKKIVFNFDGNPGLYRGNKKHFKLVVGISIGVLVTLLLLFLVSLVLLLNTRRKASQKKREEKAGISRRTNSKPLTGYSFLRGGNLMDENTTCYIALSELKEATDNFSKKIGKGSFGSVYYGKMRDGKEIAVKSMNESSCHGNQQFVNEVALLSRIHHRNLVPLIGYCEEECQHILVYEYMHNGTLRDHIHESSKKKNLDWLARLRIAEDAAKGLEYLHTGCNPSIIHRDIKTGNILLDINMRAKVSDFGLSRLAEEDLTHISSIARGTVGYLDPEYYASQQLTEKSDVYSFGVVLLELISGKKPVSSEDYGAEMNIVHWARSLTRKGDAMSIIEPSLAGNAKTESIWRVVEIAMQCVEQHGASRPRMQEIILAIQDAIKIEKGTENKLKSSSSFSGSSSSKPHSSRKTLLTSFLEIESPDVSNGCLPSAR 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01294 935 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 409 508 - -
Pumo6g01294 935 SUPERFAMILY Protein kinase-like (PK-like) 597 876 IPR011009 -
Pumo6g01294 935 SUPERFAMILY L domain-like 398 506 - -
Pumo6g01294 935 ProSiteProfiles Protein kinase domain profile. 609 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01294 935 ProSitePatterns Protein kinases ATP-binding region signature. 615 637 IPR017441 GO:0005524
Pumo6g01294 935 Gene3D Phosphorylase Kinase; domain 1 589 684 - -
Pumo6g01294 935 Gene3D Transferase(Phosphotransferase) domain 1 685 902 - -
Pumo6g01294 935 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 685 892 - -
Pumo6g01294 935 CDD STKc_IRAK 615 876 - -
Pumo6g01294 935 ProSitePatterns Serine/Threonine protein kinases active-site signature. 730 742 IPR008271 GO:0004672|GO:0006468
Pumo6g01294 935 PANTHER OS07G0107800 PROTEIN-RELATED 456 883 - -
Pumo6g01294 935 FunFam serine/threonine-protein kinase PBS1-like 588 684 - -
Pumo6g01294 935 Gene3D Ribonuclease Inhibitor 371 519 IPR032675 -
Pumo6g01294 935 Pfam Protein tyrosine and serine/threonine kinase 611 876 IPR001245 GO:0004672|GO:0006468
Pumo6g01294 935 Pfam Malectin-like domain 29 362 IPR024788 -
Pumo6g01294 935 SMART serkin_6 609 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01294 Pumo-Chr6 17208477 17214264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01294 1 935 Receptor kinase-like Gene Family AT1G67720 67.697 0.0 1281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pumo6g01294 Malectin_like 4.4e-90 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01294 - - gmx:100790944 1691.4