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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Pumo6g01293
ATGGACAATGGTTGCTTCTCTTCTCCACGCCACGATGCTTTTCCAGCTGGTCTGCGAGTTCTTGTTGTTGATGATGATCCAACATGGCTGAGGATCCTTGAAAAGATGCTCAAGAAGTGCTTGTATGAAGTGACAACATGTTGTTTAGCAACAGAGGCTCTGAAAAAACTTCGTGAAAGGAAAGATGCATATGACATAGTGATCAGCGATGTGAACATGCCTGACATGGATGGCTTCAAACTTCTCGAGCATGTTGGACTTGAGATGGATCTTCCTGTCATCATGATGTCTGTTGATGGAGAAACAAGCAGGGTGATGAAGGGTGTCCAACATGGAGCATGTGATTATCTCCTCAAGCCTATTAGGATGAAAGAACTGCGAAACATATGGCAACACGTCTTTAGAAAAAGGATGCACGAGGCAAGAGATTTTGAAAGTCTTGAGGGTTTTGAGGGCATTCACTTAATGAGAAATGGATCAGATCACTCTGATGATGGTAACCTGTTTGCTGTAGAAGAAATTACCTCAATGAAGAAAAGAAAAGATGCAGATAACAAACATGATGATAAAGAATTTGGAGATCATTCTCCCACAAAGAAAGCTAGAGTAGTTTGGTCTGTGGATCTTCATCAGAAGTTTGTCAAAGCAGTGAATCAAATTGGATTTGATAAAGTTGGGCCCAAGAAAATTCTAGATTTGATGAATGTTCCATGGTTGTCTAGAGAAAATGTTGCTAGTCACTTGCAGAAATACAGGCTCTACTTGAGTAGGTTGCAAAAGGAGAATGATCAGAAATCTTCCTCAAGTGGAATAAAGCATTCGGATTCACCTTCAAAAGATCCAGGAAGTTTTAGTATTCTAAACACTTCAAACAAGCAACAAAATGATATTGCCATTGACAGCTTCAGTTATTCAGATGGAACTCTACTACTTCAGATGGATGCTACAAGTCATGAAGGTGATCTCAAGGGAATTGTGTCAGAGCCTGCAACCGAAAAAAGGAGAGCTTCCACCAGTGACATTCCTGACCCAAAGATACAAAAAAGTTCACAGATGGGCCTTAATCAACCTTTTGCATCTGTAGAGTCATCAGAAGCAAACCATGCAGTTTTTGATTGCACCATACCAACACAGTACTCTTGGAGTGAGTTTCCAAAAGGGCCACTCAAAGAAGAACAGAAGACACTTGTTCAATTAGAGGATAGCTTCAGCCAGTTGCCATTACATGGTACACATACACAGCATCACATTCAGGTCGATCAATCACAATCAATTGCCTCAATTAATTCCAATCCCTCTATAACAAAAGAAGAGGTTGCTGCCAGCTTAGAGACCAAACCTTTGTATGCTGGTTACAAGAGTGACTATGTCAGTCCTGTGAGTTCAATAGGATCTGCAGTTGAAACCTTTCCTAATCAGTCCAAAAGCATTATGGTGAATGATCAATCTTCAGAGCCCACTTTCACCTCAAATTTGAGCTTGAAGACTCAGGGATTTAATCTAGATTGCATTTCTGATCTGGATTTTTACCACAGAAACCTATTATTGGGTGGTGAGGCTGCTTCTGCACCTTTGGAGGAGGACCTGAATTTCTTTTTGCTACAAAGTGAATGCTACAACATGAATTTTGGCCTGCAGAATATAGATATGTCAGAGTATTATGATCCAAGGCTTATTGCTGAAGGCCCTAGCCACTTTTATGATTCAGCAGATTATTCATCGGTAGATCAAAGTCTATTCATAGCATGA
1749
0.4042
MDNGCFSSPRHDAFPAGLRVLVVDDDPTWLRILEKMLKKCLYEVTTCCLATEALKKLRERKDAYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKRMHEARDFESLEGFEGIHLMRNGSDHSDDGNLFAVEEITSMKKRKDADNKHDDKEFGDHSPTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLSRENVASHLQKYRLYLSRLQKENDQKSSSSGIKHSDSPSKDPGSFSILNTSNKQQNDIAIDSFSYSDGTLLLQMDATSHEGDLKGIVSEPATEKRRASTSDIPDPKIQKSSQMGLNQPFASVESSEANHAVFDCTIPTQYSWSEFPKGPLKEEQKTLVQLEDSFSQLPLHGTHTQHHIQVDQSQSIASINSNPSITKEEVAASLETKPLYAGYKSDYVSPVSSIGSAVETFPNQSKSIMVNDQSSEPTFTSNLSLKTQGFNLDCISDLDFYHRNLLLGGEAASAPLEEDLNFFLLQSECYNMNFGLQNIDMSEYYDPRLIAEGPSHFYDSADYSSVDQSLFIA
582
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Pumo6g01293
582
MobiDBLite
consensus disorder prediction
321
351
-
-
Pumo6g01293
582
PIRSF
RR_ARR_type-B
2
565
IPR017053
GO:0003677|GO:0003700|GO:0009736
Pumo6g01293
582
ProSiteProfiles
Response regulatory domain profile.
19
134
IPR001789
GO:0000160
Pumo6g01293
582
MobiDBLite
consensus disorder prediction
262
288
-
-
Pumo6g01293
582
FunFam
Two-component response regulator
196
259
-
-
Pumo6g01293
582
CDD
REC_typeB_ARR-like
20
134
-
-
Pumo6g01293
582
SMART
REC_2
18
130
IPR001789
GO:0000160
Pumo6g01293
582
PANTHER
TWO-COMPONENT RESPONSE REGULATOR
18
267
IPR045279
GO:0009736
Pumo6g01293
582
NCBIfam
myb-like DNA-binding domain, SHAQKYF class
200
253
IPR006447
GO:0003677
Pumo6g01293
582
Pfam
Response regulator receiver domain
20
129
IPR001789
GO:0000160
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Pumo6g01293
Pumo-Chr6
17192853
17197745
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Pumo6g01293
12
266
Response Regulator Gene Family
AT2G25180
54.545
3.04e-82
267
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
GARP-ARR-B
Pumo6g01293
Response_reg
2.4e-24
CL0304
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Pumo6g01293
K14491
-
gmx:100778324
1103.58
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Pumo6g01293
6
17192853
17197745
Pumo6g01293
6
17192853
17197745
ECH
Pumo1g00416
1
5858980
5863138
Pumo6g01293
6
17192853
17197745
PCT
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