Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01291 ATGGAGATGGAATTAATATCGAGAGAAAGCATCAAACCCTCCACACCCACCCCTTCTCACCTCAGAATCTATCCCCTCTGCTTCATAGATCACATCGTTTTTCGCAACTACATCCCATTACTTTTCTTTTACTCCACAAACGATGATACCCATAACCAAACATCCAAAATATTAGCACTCAAAAAATCCTTATCAGAAGTTTTATCCCGATACTACCCCTTCGCAGGCAGGCTCAGAGATCAAGTTTCCATTGACTGCAACGACCAAGGAGTGTCGTTTCTAGTCACAAGGTTCAGATGCAACCTATCATGGATCCTCCAGAACCCCACCCAAGCATCGTTGAACCCTTTGTTCCCCGATCAATTGCAGTGGAAACCTATGAACACAACTTCAACAATAGTAGCCATTCAAATAAACTGTTTTGCATGCGGAGGAATGGCAATAAGCCTGTGCATGTGTCACAAAGTTGCCGACGCCGCCACACTTTCAAACTTCATCAACGACTGGGCCACACTGAACCGTGAAGAACAACAAGAAAAAGAAAAGTCATTATTACCCTTCCCAGTTCCCGGGGCTTCGTTTTTCCCACGAGGGGATTTACCTGTTTTCCCAGAAGCCGCGTTCGTGAAAAACGACACCGTTTGCAGAAGGTTTGTCTTCGAGGCCTCTAAGATTGACTCCCTCAAAGCCATAGTGTCCTCCCGCAACGTTCCAAACCCCACGCGCGTGGAACTTGTCAGCGCGTTGATTTACAAGCGCGCGGTTTCGGCTTTAGGGTTGACTTCCAAGACGACGTCGTTCCGCACCGCTGTGAATCTCCGGAAGAGAACGGTTCCTCCACTTCCGGAGAGGAGCGTGGGAAACTTGGTTTGGTTCCTCTTCGTGTTTAACCCTAATTCGGAAGCGGCACTGCATGAGTTGGTCCTCAAAATGAAACAAGGGATGTTGGAGTTTTCTGACACGTACGCGAAGAAGTTTGGAGGGAAGGATAAGGACTTAAGGTTCATCTCGGAGTGTCTGAAGCAAGCTACTTCGGTTCCCGAGCCTATTGGTTCGGATGAGGAGAGTCAAACTATGTTTTGTTGTGCGAGTTGGTGCAGGTTTCCGATGTATGAAGCGGATTTTGGGTGGGGGAAACCGGTGTGGTTTACCACTAGTGAGTGCCCCGTGAGGAATAGCATTGTTTTGATGGATACAAGAGATGGTGGTAGGATTGAAGCGCTTGTGAATATGGAAGAGAAAGACATGGCTAGGTTTGAGCGTGACGTGGAGCTTCTTCAATATGCTTCTCTTAATCCTGCAGTTGGACATGATGAAGTTACGAATTAG 1329 0.4725 MEMELISRESIKPSTPTPSHLRIYPLCFIDHIVFRNYIPLLFFYSTNDDTHNQTSKILALKKSLSEVLSRYYPFAGRLRDQVSIDCNDQGVSFLVTRFRCNLSWILQNPTQASLNPLFPDQLQWKPMNTTSTIVAIQINCFACGGMAISLCMCHKVADAATLSNFINDWATLNREEQQEKEKSLLPFPVPGASFFPRGDLPVFPEAAFVKNDTVCRRFVFEASKIDSLKAIVSSRNVPNPTRVELVSALIYKRAVSALGLTSKTTSFRTAVNLRKRTVPPLPERSVGNLVWFLFVFNPNSEAALHELVLKMKQGMLEFSDTYAKKFGGKDKDLRFISECLKQATSVPEPIGSDEESQTMFCCASWCRFPMYEADFGWGKPVWFTTSECPVRNSIVLMDTRDGGRIEALVNMEEKDMARFERDVELLQYASLNPAVGHDEVTN 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01291 442 Pfam Transferase family 2 425 - -
Pumo6g01291 442 Gene3D - 1 200 IPR023213 -
Pumo6g01291 442 Gene3D - 211 430 IPR023213 -
Pumo6g01291 442 PANTHER F21J9.9 4 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01291 Pumo-Chr6 17165963 17167291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01291 1 421 Monolignol Biosynthesis Gene Families AT5G48930 23.736 7.88e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01291 - - gmx:100806928 716.072