Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01277 ATGGCGGCTGGGAGACATGGCGGTTACCGCGAAAACGAGTTCAGAGAGCGCGAATCTAAGCTGGAAGTTTCTAGACGCGGATTCGCGAACTCGAAAGAGGATTACGATCGTGTTAGGAATGGTGGCGGTGATGTTGTGAGGGGTGGGTCAAGGGATAGGGATAGGGATAGGGTTAGGGTGAGGCAGAAGGATATTAAGGAGAGGGAAGGTGTTAATGGTGGTTATCGATCCTCTTCGAGTAGGAGCGACTCTGGCAACAGTGGCCTTGGTCCTCGCCGGTGTGGTTTCTCTGTCAAGGCAATTGATAGAGAGCCTGGTGAGCTTTCCAGTGAGAGTGGCTCTGATGATGCTATTGAATCAGAGCCGGGGGTGAAAGACTCCGAGGTTGCCATGTTGGAAGAAACCAGGACTCGATCGCCTCTGGCGCCGGAGAGGAAAAGGAAGTTTTCGCCCATAGTGTGGGATCAGGATGACAAGGATGTCAACGAGTCATCCAAAGTTAGGGTTTCTGCCTCGGCAGTGCTTCCTCCTCCGCCTCCATTGCCAAAGGTGTTCCGTCAGTCACAGTCGCCGAATGCTCTGGACGGTGGAGTTGAAATACATCCTGTCAAGAACAGGGAGACTGAGGATCTTCAGTTGAATGCAGCATCTAAGGTTACCTTGCCCTCTCCTTCAGGTTTGCATTCATTGCCGCCAAAAGGAAGGTGGGCTAATGATCTGGAAGCCGAGCATCCAGAAGGTGAAGATTATGTCCCAACTCGCAATATATCGTCTTCAAGATGGGCAGCTGGAGATAACTCTCCTGGTGATGAGGGTGAGATCCTCAATGATGAGGAAATGCCCAAATGGAGGAGGAGGGTGTCTCCTGAATTATTGGATGGTAGACTAAGGAACAAGCTATTGAGCCCTGAGGAATCTAAGGTAGAAGGTATTGAAAGAGCTAGAGCCAGATCATCTGATTCTGAAGAAAGAGGTGTCCGTGGGAGAACTTCCAGTGGTGATGATCATCATGGTATTGAGTCAGAGAAGGATGACTACATGGAGATTGATGCTCAAGGTGGGAAAAGTGAAACCAGTGTCAGTCACTCAGACACGGATTCTGAAGATGAAGATGATGGCCGGGAGACCCCAGAACCTCTTGCTCCACCGCAAAGAACAGTCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTTAACAAGATAGATGAAGGAACATACGGTGTTGTATATAGGGCTAGGGATAAAAAGACTGGAGAAATTGTAGCATTGAAGAAGGTCAAGATGGAGAAGGAAAAAGAGGGCTTCCCACTGACTTCTCTTAGGGAAATAAACATTCTTCTTTCTTTTCACCACCCATCCATAGTTGACGTTAAAGAAGTAGTGGTAGGAAGTAGCCTTGATAGTATTTTCATGGTCATGGAATATATGGAACATGACCTTAAAGGACTAATGGAGGCAATGAAGCAACCTTTTAGCCAAAGTGAAGTGAAGTGCTTGATGATCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATTTAAAGACTTCAAACCTGCTTCTAAATAATAGGGGTGAGCTCAAAATTTGTGATTTTGGCTTGGCTCGTCAGTATGGGAGTCCTTTAAAGCCATATACACACCTGGTGGTTACTCTTTGGTACAGGGCACCTGAACTTCTTCTGGGGGCAAAACAGTATTCAACAGCCATTGACATGTGGTCTTTAGGTTGTATAATGGCTGAGCTATTGTCTAAGGAACCACTGTTTAATGGGAAAACAGAGTTTGATCAACTTGACAAGATTTTCCGGATTCTTGGCACACCAAATGAAACAATTTGGCCTGGGTTCTCAAAATTACCTGGAGTCAAGGTCAATTTTGTCAAACATCAGTACAACCTCCTGCGTAAAAAGTTTCCTGCCACATCATTCACTGGATCTCCCGTTCTTTCTGATTCTGGATTTGATTTGTTGAACAAGCTTCTAACTTATGACCCTGAGAAGCGGATCACTGCCGAAGCTGCTCTAAATCATGAGTGGTTCCGTGAAGTTCCTCTTCCCAAAAGTAAAGAATTCATGCCTACATTTCCTGCTCAACATGCTCAGGACAGGCGTGTGCGGAGAATATACAAGAGTCCGGATCCTTTAGAGGAGCAGCGCCGGAAGGAGTTGCAGCAGGGTGAATCAGGGACTGGTGGAATTTTTGGCTAA 2238 0.4651 MAAGRHGGYRENEFRERESKLEVSRRGFANSKEDYDRVRNGGGDVVRGGSRDRDRDRVRVRQKDIKEREGVNGGYRSSSSRSDSGNSGLGPRRCGFSVKAIDREPGELSSESGSDDAIESEPGVKDSEVAMLEETRTRSPLAPERKRKFSPIVWDQDDKDVNESSKVRVSASAVLPPPPPLPKVFRQSQSPNALDGGVEIHPVKNRETEDLQLNAASKVTLPSPSGLHSLPPKGRWANDLEAEHPEGEDYVPTRNISSSRWAAGDNSPGDEGEILNDEEMPKWRRRVSPELLDGRLRNKLLSPEESKVEGIERARARSSDSEERGVRGRTSSGDDHHGIESEKDDYMEIDAQGGKSETSVSHSDTDSEDEDDGRETPEPLAPPQRTVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMIQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRILGTPNETIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEAALNHEWFREVPLPKSKEFMPTFPAQHAQDRRVRRIYKSPDPLEEQRRKELQQGESGTGGIFG 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01277 745 CDD STKc_CDC2L1 393 690 IPR045267 GO:0004674|GO:0005524|GO:0006468
Pumo6g01277 745 Gene3D Transferase(Phosphotransferase) domain 1 482 721 - -
Pumo6g01277 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
Pumo6g01277 745 SMART serkin_6 399 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01277 745 SUPERFAMILY Protein kinase-like (PK-like) 391 696 IPR011009 -
Pumo6g01277 745 ProSiteProfiles Protein kinase domain profile. 399 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01277 745 MobiDBLite consensus disorder prediction 720 745 - -
Pumo6g01277 745 PANTHER CELL DIVISION PROTEIN KINASE 397 696 - -
Pumo6g01277 745 Pfam Protein kinase domain 399 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01277 745 MobiDBLite consensus disorder prediction 275 291 - -
Pumo6g01277 745 Gene3D Phosphorylase Kinase; domain 1 384 481 - -
Pumo6g01277 745 MobiDBLite consensus disorder prediction 73 87 - -
Pumo6g01277 745 MobiDBLite consensus disorder prediction 305 386 - -
Pumo6g01277 745 MobiDBLite consensus disorder prediction 216 291 - -
Pumo6g01277 745 MobiDBLite consensus disorder prediction 118 165 - -
Pumo6g01277 745 MobiDBLite consensus disorder prediction 8 71 - -
Pumo6g01277 745 FunFam Cyclin-dependent kinase G-2 482 721 - -
Pumo6g01277 745 FunFam cyclin-dependent kinase G-2 isoform X1 384 481 - -
Pumo6g01277 745 MobiDBLite consensus disorder prediction 305 351 - -
Pumo6g01277 745 MobiDBLite consensus disorder prediction 1 198 - -
Pumo6g01277 745 MobiDBLite consensus disorder prediction 720 734 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01277 Pumo-Chr6 16950850 16954106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01277 390 735 Core Cell Cycle Gene Families AT5G10270 45.304 2.85e-94 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Pumo6g01277 Pkinase 1.5e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01277 K08818 - gmx:100792524 1306.97