Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01265 ATGGATGAAAATACTACTTGCTATATTGCACTCTCAGAGTTGAAAGAAGCTACAGACAATTTTTCAAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTCTACTATGGCAAAATGAGAGATGGAAAAGAAATAGCAGTTAAAAGTATGAATGAATCATCTTGCCATGGGAACCAGCAATTTGTTAATGAGGTGGCCCTCCTATCCAGAATTCATCACAGAAATTTGGTTCCTTTGATTGGATATTGTGAAGAAGAATGTCAGCATATTCTGGTTTACGAGTATATGCACAATGGCACTTTACGCGATCACATTCATGGTCTAATGGCTAACCTCACAACCTCGTACTATGCAAGTCAGCAATTGACAGAAAAGAGTGACGTGTATAGTTTTGGAGTTGTTCTGCTAGAACTGATATCTGGAAAAAAGCCTGTGTCTTCTGAAGATTATGGTGCTGAAATGAACATTGTTCACTGGGCAAGGTCCTTAACTCGTAAAGGAGATGCAATGAGCATCATTGAGCCTTCTCTAGCTGGGAATGCCAAAACTGAGTCCATTTGGAGGGTGGTTGAAATTGCCATGCAATGTGTAGAACAACATGGTGCCTCCAGGCCAAGGATGCAAGAAATCATTTTGGCTATCCAAGATGCTATCAAGATTGAAAAAGGAACAGAAAATAAGCTAAAATCATCATCATCATTTTCAGGTAGTAGTAGTTCAAAGCCACATTCTTCCCGAAAAACTTTACTCACAAGCTTTCTTGAAATTGAGAGCCCTGACGTGTCAAATGGTTGCCTTCCATCAGCAAGATAA 810 0.3951 MDENTTCYIALSELKEATDNFSKKIGKGSFGSVYYGKMRDGKEIAVKSMNESSCHGNQQFVNEVALLSRIHHRNLVPLIGYCEEECQHILVYEYMHNGTLRDHIHGLMANLTTSYYASQQLTEKSDVYSFGVVLLELISGKKPVSSEDYGAEMNIVHWARSLTRKGDAMSIIEPSLAGNAKTESIWRVVEIAMQCVEQHGASRPRMQEIILAIQDAIKIEKGTENKLKSSSSFSGSSSSKPHSSRKTLLTSFLEIESPDVSNGCLPSAR 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01265 269 Gene3D Phosphorylase Kinase; domain 1 2 93 - -
Pumo6g01265 269 FunFam receptor-like serine/threonine-protein kinase NCRK 1 94 - -
Pumo6g01265 269 SUPERFAMILY Protein kinase-like (PK-like) 8 212 IPR011009 -
Pumo6g01265 269 Pfam Protein tyrosine and serine/threonine kinase 21 107 IPR001245 GO:0004672|GO:0006468
Pumo6g01265 269 Pfam Protein tyrosine and serine/threonine kinase 118 210 IPR001245 GO:0004672|GO:0006468
Pumo6g01265 269 ProSitePatterns Protein kinases ATP-binding region signature. 25 47 IPR017441 GO:0005524
Pumo6g01265 269 ProSiteProfiles Protein kinase domain profile. 19 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01265 269 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 115 242 - -
Pumo6g01265 269 Gene3D Transferase(Phosphotransferase) domain 1 94 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01265 Pumo-Chr6 16809671 16811831 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01265 106 269 Receptor kinase-like Gene Family AT1G67720 68.485 1.12e-62 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pumo6g01265 PK_Tyr_Ser-Thr 7.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01265 - - oeu:111376339 327.405