Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01262 ATGGAGATGGAATTAATATCGAGAGAAAGCATCAAACCCTCCACACCCACCCCTTCTCACCTCAGAATCTATCCCCTCTGCTTCATAGATCACATCGTTTTTCGCAACTACATCCCATTACTTTTCTTTTACTCCACAAACGATGATACCCATAACCAAACATCCAAAATATTACCACTCAAAAAATCCTTATCAGAAGTTTTATCCCGATACTACCCCTTCGCAGGCAGGCTCAGAGATCAAGTTTCCATTGACTGCAACGACCAAGGAGTGTCGTTTCTAGTCACAAGGTTCAGATGCAACCTATCATGGATCCTCCAGAACCCCACCCAAGCATCGTTGAACCCTTTGTTCCCCGATCAATTGCAGTGGAAACCTATGAACACAACTTCAACAATAGTAGCCATTCAAATAAACTGTTTTGCATGCGGAGGAATGGCAATAAGCCTGTGCATGTGTCACAAAGTTGCCGACGCCGCCACACTTTCAAACTTCATCAACGACTGGGCCACACTGAACCGTGAAGAACAACAAGAAAAAGAAAAGTCATTATTACCCTTCCCAGTTCCCGGGGCTTCGTTTTTCCCACAAGGGGATTTACCTGTTTTCCCAGAAGCCGCGTTCGTGAAAAACGACACCGTTTGCAGAAGGTTTGTCTTCGAGGCCTCTAAGATTGACTCCCTCAAAGCCATAGTGTCCTCCCGCAACGTTCCAAACCCCACGCGCGTGGAACTTGTCAGCGCGTTGATTTACAAGCGCGCGGTTTCGGCTTTAGGGTTGACTTCCAAGACGACGTCGTTCCGCACCGCTGTGAATCTCCGGAAGAGAACGGTTCCTCCACTTCCGGAGAGGAGCGTGGGAAACTTGGTTTGGTTCCTCTTCGTGTTTAACCCTAATTCGGAAGCGGCACTGCATGAGTTGGTCCTCAAAATGAAACAAGGGATGTTGGAGTTTTCTGACACGTACGCGAAGAAGTTTGGAGGGAAGGATAAGGACTTAAGGTTCATCTCGGAGTGTCTGAAGCAAGCTACTTCGGTTCCCGAGCCTATTGGTTCGGATGAGGAGAGTCAAACTATGTTTTGTTGTGCGAGTTGGTGCAGGTTTCCGATGTATGAAGCGGATTTTGGGTGGGGGAAACCGGTGTGGTTTACCACTAGTGAGTGCCCCGTGAGGAATAGCATTGTTTTGATGGATACAAGAGATGGTGGTAGGATTGAAGCGCTTGTAAATATGGAAGAGAAAGACATGGCTAGGTTTGAGCGTGACGTGGAGCTTCTTCAATATGCTTCTCTTAATCCTGCAGTTGGACATGATGAAGTTACGAATTAG 1329 0.471 MEMELISRESIKPSTPTPSHLRIYPLCFIDHIVFRNYIPLLFFYSTNDDTHNQTSKILPLKKSLSEVLSRYYPFAGRLRDQVSIDCNDQGVSFLVTRFRCNLSWILQNPTQASLNPLFPDQLQWKPMNTTSTIVAIQINCFACGGMAISLCMCHKVADAATLSNFINDWATLNREEQQEKEKSLLPFPVPGASFFPQGDLPVFPEAAFVKNDTVCRRFVFEASKIDSLKAIVSSRNVPNPTRVELVSALIYKRAVSALGLTSKTTSFRTAVNLRKRTVPPLPERSVGNLVWFLFVFNPNSEAALHELVLKMKQGMLEFSDTYAKKFGGKDKDLRFISECLKQATSVPEPIGSDEESQTMFCCASWCRFPMYEADFGWGKPVWFTTSECPVRNSIVLMDTRDGGRIEALVNMEEKDMARFERDVELLQYASLNPAVGHDEVTN 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01262 442 Gene3D - 211 430 IPR023213 -
Pumo6g01262 442 PANTHER F21J9.9 4 430 - -
Pumo6g01262 442 Pfam Transferase family 2 425 - -
Pumo6g01262 442 Gene3D - 1 201 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01262 Pumo-Chr6 16767262 16768590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01262 1 421 Monolignol Biosynthesis Gene Families AT5G48930 23.736 6.20e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01262 - - gmx:100806928 717.613