Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01235 ATGGAGGACTTATTTTCAAACATGGAGGACTCATCAGCACAGAAGGGCATCCTCAAAAGTCCAGCACTCCTTAAGTACATCTTTGAAACAAGTGGCTATCCTAAAGAGCACGAGCAATTGAAGCAACTCAGAGAGACAACAGTGCAGAAATACGGGATTAAGAGTGTGATGAATGTGGCGGTGGATGAGGCCCAATTCCTGTCTATTCTTCTAAAAATCATGAACGCGAAGAAAACACTAGAAATTGGAGTTTTCACGGGTTATTCTCTTCTTTCTACAGCTCTTGCTCTTCCTCCTGATGGCAAGATAATAGGAATTGATTACGACAGAGAAGCGTACGAGATTGGATTGGCCTTCATTCAGAAGGCAGGAGAGGAGCACAAAATTGACTTTATCCTAGCAGATGCATTATCTGCCCTCCATGATCTTATTGATGGCAAACATGAAGAATCATTTGACTACGTGTTTGTGGACTCTGACATTAAAGCCATGCAAACTATAGGAAGAAAGAAGGATTGTGGAGAACATGAGTAA 534 0.4176 MEDLFSNMEDSSAQKGILKSPALLKYIFETSGYPKEHEQLKQLRETTVQKYGIKSVMNVAVDEAQFLSILLKIMNAKKTLEIGVFTGYSLLSTALALPPDGKIIGIDYDREAYEIGLAFIQKAGEEHKIDFILADALSALHDLIDGKHEESFDYVFVDSDIKAMQTIGRKKDCGEHE 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01235 177 Gene3D Vaccinia Virus protein VP39 5 169 IPR029063 -
Pumo6g01235 177 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 20 164 IPR029063 -
Pumo6g01235 177 CDD AdoMet_MTases 80 158 - -
Pumo6g01235 177 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 16 177 IPR002935 GO:0008171
Pumo6g01235 177 PANTHER O-METHYLTRANSFERASE-RELATED 13 162 - -
Pumo6g01235 177 Pfam O-methyltransferase 29 162 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01235 Pumo-Chr6 16417831 16421561 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01235 8 160 Monolignol Biosynthesis Gene Families AT1G67990 56.863 2.63e-57 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01235 K00588 K13272 gmx:100813350 273.863