Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01234 ATGTCTGCTGATATAACATGCAAGAACATTCTCCAGAGTTCAGCACTTATGAAGTACATTCTTGAAACGAGTGCCTATCCAAAAGAGCATGAACAATTGAAGGAACTCAGAGAGACCACGGTACAGAAGTGCCAGGAAAATTCGGAATATTTGATGAATGTGCCTGTGGATGAAGCACAGTTCATATCTATTTTGCTTAAAATCATGAATGCGAAGAAAACACTGGAAATTGGAGTATTCACTGGCTATTCTCTTCTTGCCACAGCTCTTGCCCTTCCTCATGATGGCATGATAACAGCAATTGATGTGGATAGAAAAGCATACGAGATTGGACTGCCATTCATTCAAAAGGCAGGAATGGAGCACAAAATTGACTTTATCCTTGGTGATGCGTTATCAGTCCTCAACGATCTTATTAATGCTAAACATGAAGACTCATTTGATTATGTATTTGTGGATGCGGACAAAGCAGAATATATAAAATATCATGAGCTGTTGTTAAAATTGGTGAAAAAGGGTGGAATAATTGCATATGACAATACTTTATGGCTTGGTACAGTGGCAATGCCCGAGGAAGACGTAAAGGTGGATATCCTAAGGCAGAAAAGAAAGCCTTTGATTGAATTCAACAGCTTTATAGCAAACGATTCTCGCTTGGAATCAGCTATCATTTCTATTGGGGATGGTGTAACCCTCTGCAGACGTCTGTGA 711 0.3952 MSADITCKNILQSSALMKYILETSAYPKEHEQLKELRETTVQKCQENSEYLMNVPVDEAQFISILLKIMNAKKTLEIGVFTGYSLLATALALPHDGMITAIDVDRKAYEIGLPFIQKAGMEHKIDFILGDALSVLNDLINAKHEDSFDYVFVDADKAEYIKYHELLLKLVKKGGIIAYDNTLWLGTVAMPEEDVKVDILRQKRKPLIEFNSFIANDSRLESAIISIGDGVTLCRRL 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01234 236 CDD AdoMet_MTases 75 178 - -
Pumo6g01234 236 Gene3D Vaccinia Virus protein VP39 1 236 IPR029063 -
Pumo6g01234 236 Pfam O-methyltransferase 22 236 IPR002935 GO:0008171
Pumo6g01234 236 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 236 IPR002935 GO:0008171
Pumo6g01234 236 PANTHER O-METHYLTRANSFERASE-RELATED 7 236 - -
Pumo6g01234 236 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 14 235 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01234 Pumo-Chr6 16375300 16378917 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01234 1 236 Monolignol Biosynthesis Gene Families AT1G67990 56.780 6.21e-91 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01234 K00588 K13272 gmx:100500657 424.091