Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01233 ATGCCTCTCCTCCGTACGTTACCGACGGCGTCCACAACAGATCTGGATGTCGGAGACATGCGTGACGGATCTTACATCCTTGAAACGAGTGGCTATCCTCAAGAGCATGAACAATTAAAGCTACTCAGAGAGTCCACCGTACAGAAGTACCCAAACATATGGGTTCATATGATGAATGTGCCTGTGGATGAAGCACAGTTCATATCTATTCTGCTTAAAATCATGAATGCGAAGAAAACACTGGAAATTGGAGTATTCACTGGCTATTCTCTTCTTGCTACAGCTCTTGCTCTGCCTCATGATGGCAAGATAACGGCAATTGATGTGAATAGAGATGCATATGAGATTGGATTACCCTTCATTCGGAAGGCAGGAGTGGAGCACAAAATTGACTTTATCCTTGGTGATGCACTATCAGTCCTCAATAATCTGATTGATTTGTGGAGTAGATAA 453 0.4327 MPLLRTLPTASTTDLDVGDMRDGSYILETSGYPQEHEQLKLLRESTVQKYPNIWVHMMNVPVDEAQFISILLKIMNAKKTLEIGVFTGYSLLATALALPHDGKITAIDVNRDAYEIGLPFIRKAGVEHKIDFILGDALSVLNNLIDLWSR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01233 150 CDD AdoMet_MTases 81 141 - -
Pumo6g01233 150 Gene3D Vaccinia Virus protein VP39 19 148 IPR029063 -
Pumo6g01233 150 PANTHER O-METHYLTRANSFERASE-RELATED 24 145 - -
Pumo6g01233 150 Pfam O-methyltransferase 28 145 IPR002935 GO:0008171
Pumo6g01233 150 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 146 IPR029063 -
Pumo6g01233 150 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 15 150 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01233 Pumo-Chr6 16365637 16370318 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01233 24 146 Monolignol Biosynthesis Gene Families AT1G67990 58.537 6.35e-48 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01233 K00588 K13272 gmx:100500657 202.986