Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01232 ATGGAGGGCTCATCAGCACAGAAGGGCATCCTCAAAAGTCCAGCACTCCTTAAGTACATCTTTGAAACGAGTGGCTATCCCAAAGAGCACGAGCAATTGAAGCAACTCCGAGAGACAACAGTGCAGAAATACGGGAAGAAGAGTTTGATGAATGTGCCGGTGGATGAGGCTCAATTCCTATCTATTCTTCTAAAAATCATGAACGCAAAGAAAACACTAGAAATTGGAGTTTTCACTGGTTATTCTCTTCTTTCTACATCTCTCGCTCTTCCTCCTGATCAGGGACGGATTTGGGAGGGGAGGGGCGGGGAGGAGGCGGCATTTTTCATAATAGCAATTGATGTTGATAGAGAAGCATACGAGACTGGATTGCCCTTCATTCAGAAGGCAGGAGTGGAGCACAAAATTGACTTTATCCTAGCAGATGCATTATCTGCCCTCCATGATCTTATTGATAAAATTTTTATAAAGTATCATGAGCTGTTGTTAAAATTGGTGAAGAAGGGTGGAATAATTGCATATGACAACACCTTATGGCTTGGCACAGTGGCTGTGTCTGAGAATGATAAAATAGAAGATAGATTATGGCAAAATAGGAAGCCTGCACTCGAATTCAACACCTATATAGCAAATGATAATCGCATAGAATCGAGAATTCTTTCGATTGGGGATGGTGTAACTCTTTGTCGATATATTTAA 699 0.4149 MEGSSAQKGILKSPALLKYIFETSGYPKEHEQLKQLRETTVQKYGKKSLMNVPVDEAQFLSILLKIMNAKKTLEIGVFTGYSLLSTSLALPPDQGRIWEGRGGEEAAFFIIAIDVDREAYETGLPFIQKAGVEHKIDFILADALSALHDLIDKIFIKYHELLLKLVKKGGIIAYDNTLWLGTVAVSENDKIEDRLWQNRKPALEFNTYIANDNRIESRILSIGDGVTLCRYI 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01232 232 Pfam O-methyltransferase 22 231 IPR002935 GO:0008171
Pumo6g01232 232 PANTHER O-METHYLTRANSFERASE-RELATED 7 230 - -
Pumo6g01232 232 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 232 IPR002935 GO:0008171
Pumo6g01232 232 Gene3D Vaccinia Virus protein VP39 2 232 IPR029063 -
Pumo6g01232 232 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 231 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01232 Pumo-Chr6 16340629 16348341 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01232 1 230 Monolignol Biosynthesis Gene Families AT1G67990 51.020 1.14e-74 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01232 K00588 K13272 gmx:100813350 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01232 6 16340629 16348341 Pumo6g01232 6 16340629 16348341 ECH