Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01226 ATGAAACCCACGGCAACATTCTTGTTTCTCCTAACCTTAACCACAACAACACTCGTTTGTCTTTGCCTTGGAACGACAACGTTCCAAGCAACCCTCCTTATAACCCTCTTCGCAATTTCCCTAAACTACTGGCTTGTCCCTGGAGGCTTTGCATGGAGAAACTATCACAACGCAAAACTTATTGGGCCTATGGGCTGGCCCATACTCGGGACTCTGCCTCTGATGGGCTCTTTAGCGCACGCGAAACTCGCTGCTCTAGCCGCGTCGTTAAACGCGAAGAGGCTAATGGCGCTGAGCCTGGGGCCCACTCGTGTTGTTATAAGCAGCCACCCCGAGACCGCTAGAGAGATTTTACTCGGTTCCTCATTTTCGGATCGTCCGATAAAGGAATCGGCACGCGCTCTCATGTTCGAGCGTGCCATTGGTTTCGCTCCTTCCGGGACCTACTGGCGACACCTACGTAGGATCGCGGCGTTCCACATGTTCTCTCCGAGGAGGATTCAGGGCTTGGAGGGTCTGCGGCAGCGCGTGGGTGAGGACATGGCGAAGAGCGCGTGGAGGGAGATGGAGGAGAAGGGGGTGGTGGAGGTTCGGGGGGTATTTCAGGAAGGGTCACTTTGCAATATTTTGGAGAGTGTGTTTGGGAGTAATGATAAGAGTGAGGAGTTGGGGGATATGGTTAGGGAAGGGTATGAGTTGATTGAAAAGTTTAACTTGGAGGATTATTTTCCTTTGAAGTTTTTGGATTTTTATGGGGTGAAAAGAAGGTGCCACAAGTTGGCGGCTAAGGTTGGTAGTGTGGTGGGCCAAATTGTGGAGGAACGAAAAAGAGAGGGGGGTTTTGTTGGGAAGAATGATTTTCTTAGCACTTTGCTATCCTTGCCCAAAGAAGAAAGGTTGGCTGATTCAGATATGGTGGCTATTCTGTGGGAAATGGTTTTTCGAGGAACAGACACAGTTGCAATACTCCTTGAATGGGTCATGGCGAGGATGGTTTTACACCAAGACGTACAAAAGAAAGCCTGCGAAGAAATCGACACGTGCATCGGCCAAAACAGTCACGTGCGAGACTCGGATATTGCGAATCTCCCTTACCTCCAGGCCATAGTGAAAGAAGTTCTCCGGCTGCACCCACCGGGCCCACTACTATCATGGGCCCGTCTCGCAGTCCATGACGTCCACGTGGACAAAGTCCTTGTGCCAGCTGGCACAACAGCGATGGTTAACATGTGGGCCATATCGCATGACTCGTCCATCTGGGAAGACCCATGGGCTTTCAAGCCCGAGAGGTTCCTCAAAGAAGACGTTTCCATCATGGGATCGGATTTGAGGCTTGCACCCTTCGGGGCTGGACGTAGGGTGTGTCCGGGCCGGGCCTTGGGCTTGGCCACGGCCCATCTCTGGCTCGCGCAACTTCTTCGCCACTTCATATGGCTTCCCGCGCAACCCGTGGATCTTTCCGAATGCCTTAGGCTTTCCATGGAAATGAAGACACCTCTGCGATGTCTAGTGGTTCGTAGATAA 1524 0.521 MKPTATFLFLLTLTTTTLVCLCLGTTTFQATLLITLFAISLNYWLVPGGFAWRNYHNAKLIGPMGWPILGTLPLMGSLAHAKLAALAASLNAKRLMALSLGPTRVVISSHPETAREILLGSSFSDRPIKESARALMFERAIGFAPSGTYWRHLRRIAAFHMFSPRRIQGLEGLRQRVGEDMAKSAWREMEEKGVVEVRGVFQEGSLCNILESVFGSNDKSEELGDMVREGYELIEKFNLEDYFPLKFLDFYGVKRRCHKLAAKVGSVVGQIVEERKREGGFVGKNDFLSTLLSLPKEERLADSDMVAILWEMVFRGTDTVAILLEWVMARMVLHQDVQKKACEEIDTCIGQNSHVRDSDIANLPYLQAIVKEVLRLHPPGPLLSWARLAVHDVHVDKVLVPAGTTAMVNMWAISHDSSIWEDPWAFKPERFLKEDVSIMGSDLRLAPFGAGRRVCPGRALGLATAHLWLAQLLRHFIWLPAQPVDLSECLRLSMEMKTPLRCLVVRR 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01226 507 FunFam Cytochrome P450 78A5 53 507 - -
Pumo6g01226 507 Gene3D Cytochrome P450 53 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g01226 507 Pfam Cytochrome P450 62 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g01226 507 CDD CYP78 93 500 - -
Pumo6g01226 507 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g01226 507 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g01226 507 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g01226 507 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g01226 507 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g01226 507 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g01226 507 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g01226 507 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g01226 507 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g01226 507 PANTHER CYTOCHROME P450 78A7-RELATED 19 507 - -
Pumo6g01226 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Pumo6g01226 507 SUPERFAMILY Cytochrome P450 62 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01226 Pumo-Chr6 16251699 16254306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01226 1 507 Cytochrome P450 AT1G13710 52.299 6.98e-180 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01226 - - gmx:100817944 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00451 1 6156427 6158661 Pumo6g01226 6 16251699 16254306 PCT