Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01206 ATGGAAATCTTTCGTCCTCAGAGTCGCAGGAACTTCTTGTCCTCCTCCAACGACGCCGTTTCTGCTCCCACCATTCCCCTCTATCGCTCTGCTCCCTCACTCGAAGTCAGGCTCGAGGATTTCGAGTCCTTCGCCATCGACCGCCTCCGAGTTCTCAAGGGGATTTCTGATGGTATGTCGCGGGGGAAAAAAGCGGAGGAAATGGAGAATTTGGTAAAGGACCTGTGGAAAATGCACATGGGACATCAACATGCATCTGAGGTTCTGAACAAGGATATTATATCTCATTTTGTTCTACGACTGGTGTATTGCAGAACGGAGGACTTGAGGAAATGGTTTCTTTCCATGGAATCTGCACTCTTTCGCTACCGCTTTCGTCTTCTGAATGCTGAAGCTCAGAGGGCAGTCATGGAAGAATTTGACCTTCCTTACAAGGCTGTTAGCAATGTGGAATTTGAGAGCATAAAAGAGAAATTGGGACAAGTTGCACGTTCTATGGGTCAGCATGTTCCCACTGCTGATGCTATCTTCTACAAGGTACCATTTGAAGAAGTTCCAGAGCTTGTTGCTGGACGGAAAGTGTTTATAAATCAAGGATATGCATATGTTGCAATGAATCAGATTGTTTCACTTGTAGCCACACTATTCCGCAGTCAGCTGTCAAAGACACTCCTCCTTACAAACAGAAAATGGACATCTTCAATTAGAGAGCAAGAGAAACATAGGTTGACTCCTATTGTGGAAGCCCTGTCCTCAAGTTATCTGGGTCCTGATTATTCTCAGTCAAGAGAATATGCTGATATATCATTAAAGGATATTGATCAAGTTGCCAAGAGCTCATTTCCTTTGTGCATGCGTCACCTATTTGATAAGCTGAAAGAGGATCATCATTTAAAGCATGGAGGGAGGATGCAACTAGGCCTCTTTCTAAAGGGTGTTGGCTTAAATCTGGATGATGCACTTGCGTTTTGGAGGGCAGAGTTCTCTAAAAAGGTTGGTTTGGAGAAGTTTGAGAAACAATATGCATACAACATACGCCATAATTATGGAAAGGAAGGGAAGAGAACTGATTATACTCCCTATTCTTGTCAAAAGATTATTTCATCAACTCCTGGAGCTGGAGATCATCATGGTTGCCCCTATCGACATTTCAGCGAAGAGAATCTAAGAGCTGCTCTAAGCGGAATGGGGGTAAACGGTCGAGCAATGGAAGATGTGATAGACAAAGTGAGAAATAAACATTATCAGTTGGCTTGCACCTTGACATTTGAAGCTCTTCATGGCATGCCGTGTGATGCAGGGATTAACCATCCAAATCAATACTTCAGTGACAGTCAAAAGATATTAAAGCCAAAGAAGGATTCTTCAGCCTAG 1374 0.4352 MEIFRPQSRRNFLSSSNDAVSAPTIPLYRSAPSLEVRLEDFESFAIDRLRVLKGISDGMSRGKKAEEMENLVKDLWKMHMGHQHASEVLNKDIISHFVLRLVYCRTEDLRKWFLSMESALFRYRFRLLNAEAQRAVMEEFDLPYKAVSNVEFESIKEKLGQVARSMGQHVPTADAIFYKVPFEEVPELVAGRKVFINQGYAYVAMNQIVSLVATLFRSQLSKTLLLTNRKWTSSIREQEKHRLTPIVEALSSSYLGPDYSQSREYADISLKDIDQVAKSSFPLCMRHLFDKLKEDHHLKHGGRMQLGLFLKGVGLNLDDALAFWRAEFSKKVGLEKFEKQYAYNIRHNYGKEGKRTDYTPYSCQKIISSTPGAGDHHGCPYRHFSEENLRAALSGMGVNGRAMEDVIDKVRNKHYQLACTLTFEALHGMPCDAGINHPNQYFSDSQKILKPKKDSSA 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01206 457 FunFam DNA primase large subunit 5 250 - -
Pumo6g01206 457 PANTHER DNA PRIMASE LARGE SUBUNIT 17 452 IPR007238 GO:0006269
Pumo6g01206 457 PIRSF DNA_primase_large 3 457 IPR016558 -
Pumo6g01206 457 Pfam Eukaryotic and archaeal DNA primase, large subunit 177 442 IPR007238 GO:0006269
Pumo6g01206 457 CDD PriL_PriS_Eukaryotic 27 445 IPR016558 -
Pumo6g01206 457 Gene3D - 5 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01206 Pumo-Chr6 15948002 15955061 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01206 1 456 Core DNA Replication Machinery Family AT1G67320 67.073 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01206 K02685 - gmx:100806321 874.774