Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01172 ATGGATACTAATTCAAGAAACTGGAGATGGGCAAGAAAGGCCCAATTGCTTGTAGCTTCTGCTCTTCTTTTACTGCAAGACTCTCTGGTCAACTCTGCTGAGGCAAGCTATGTGCACATTGTATATATGGGAGATAAGATATATCAAAATCCACAAACTACTAAAAAGTATCACCACAAAATGTTATCATCGCTCCTAGGAAGCAAAGAAGCTGCAAAGAATTCGATTCTTTACAGCTATAAGCATGGTTTTTCAGGGTTTGCTGCAAGATTGACAAAACATCAAGCAGAAGCATAG 297 0.3906 MDTNSRNWRWARKAQLLVASALLLLQDSLVNSAEASYVHIVYMGDKIYQNPQTTKKYHHKMLSSLLGSKEAAKNSILYSYKHGFSGFAARLTKHQAEA 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01172 98 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 98 IPR037045 -
Pumo6g01172 98 FunFam Subtilisin-like protease SBT5.3 27 98 - -
Pumo6g01172 98 PANTHER PROTEINASE INHIBITOR, PROPEPTIDE 30 97 - -
Pumo6g01172 98 Pfam Peptidase inhibitor I9 38 98 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01172 Pumo-Chr6 15467007 15467498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01172 17 97 Subtilisin-like Serine Gene Family AT4G10520 53.086 3.87e-22 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01172 - - gmx:100792709 174.096