Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01171 ATGGGGATCCATCATTCCAATTCAAAAACTGCATTCTCAGACAGCAACTTAGGTGAAGGAACCATCATAGGTGTCATAGACACAGGCATTTGGCCAGAGTCACCAAGTTTCAATGATGAAGCAATGGGACAAATCCCATCAAGGTGGAAAGGAGTTTGTCAAGGGGGAAAGCACTTCAACTCCACCAATTGCAACAAAAAGATAATAGGAGCAAGATGGTTCATGAAAGGAATAACTGATCAGACTAAGAAACTCCTCCAAGGAAACAACACTAATGAATATCTCTCAGCAAGAGATGCTATTGGCCATGGCACTCATACAGCTTCCACAGCAGCTGGTTACTTTGTAGGAAATGCAAATTATAGAGGACTTGCTTCTGGTTTAGCCAGAGGAGGAGCACCCTTGGCTCACTTGGCTATCTACAAGGCTTGTTGGGACTTTCCAATTGGAGATTGTACTGATGCTGATATCCTCAAAGCTTTTGACAAGGCTATACATGATGGAGTTGATGTCTTAACTGTTTCTATTGGCTTTTCCATTCCCTTGTTCTCCTATGTTGATCAACGTGATTCAATAGCAATTGGTTCCTTTCATGCAACTGCTAAGGGAATCACAGTCGTTTGTTCTGCTGGAAATTCTGGTCCTCACTCTCAAACCATTACAAATACTGCACCATGGATCATCACAGTTGGAGCTACCACCATAGATAGGGCCTTTCCAGCAGCCATCACTCTTGGAAATAACCGCACTGTGTGGGGACAGTCCATTGATATTGAAAAACATAATCTTGGATCTGTTGGGCTCACATATTCTGAACGCATAGCTCTAGACCCATCAGATAATTTGGCGTGA 852 0.4296 MGIHHSNSKTAFSDSNLGEGTIIGVIDTGIWPESPSFNDEAMGQIPSRWKGVCQGGKHFNSTNCNKKIIGARWFMKGITDQTKKLLQGNNTNEYLSARDAIGHGTHTASTAAGYFVGNANYRGLASGLARGGAPLAHLAIYKACWDFPIGDCTDADILKAFDKAIHDGVDVLTVSIGFSIPLFSYVDQRDSIAIGSFHATAKGITVVCSAGNSGPHSQTITNTAPWIITVGATTIDRAFPAAITLGNNRTVWGQSIDIEKHNLGSVGLTYSERIALDPSDNLA 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01171 283 Pfam Subtilase family 18 234 IPR000209 GO:0006508|GO:0008236
Pumo6g01171 283 SUPERFAMILY Subtilisin-like 5 255 IPR036852 GO:0004252|GO:0006508
Pumo6g01171 283 Gene3D Peptidase S8/S53 domain 20 235 IPR036852 GO:0004252|GO:0006508
Pumo6g01171 283 Gene3D - 236 271 - -
Pumo6g01171 283 CDD Peptidases_S8_3 1 235 IPR034197 -
Pumo6g01171 283 PRINTS Subtilisin serine protease family (S8) signature 99 112 IPR015500 -
Pumo6g01171 283 PRINTS Subtilisin serine protease family (S8) signature 18 37 IPR015500 -
Pumo6g01171 283 ProSiteProfiles Serine proteases, subtilase domain profile. 1 283 - -
Pumo6g01171 283 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 15 255 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01171 Pumo-Chr6 15465303 15466849 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01171 1 283 Subtilisin-like Serine Gene Family AT1G32940 51.656 3.57e-100 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01171 - - gmx:100792709 548.51