Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo6g01157 | ATGAGCCCATCAAGTTCAACCATCCACTTTCTCCTCCAAATTCTTCTTGTCTGTCTACTGCACAGACCCAGCTTTGCAGTGAAAAAGCCAAGGACTCCGATCTTTTACTCATACACAAGGCACATCAATGGTTTTGCTGCAACTTTGGAAGAAGAAGTAGCTGCTGAGATAGCAAAGCATCCCAAAGTATTGTCAGTGTTTGAGAACAGAGGGAGAAAGCCACACACCACTCGTTCATGGGATTTCATGGGGCTAGAGCATAATGGGGTGATCCAATCCAACTCAATCTGGAAGAAAGCCAGATTTGGTGAGGGTGTGGTCATTGGAAACCTGGATACAGGTGTTTGGCCTGAATCAAAGAGCTTTAGTGAGGAAGGATTGGGACCAATTCCATCAAAGTGGAGAGGAATCTGTGATAACGGAAATGATCATACTTTTCACTGCAACAGGAAGCTAATAGGGGCAAGGTACTTCAACAAGGGGTACGCCTCGGTGGCGGGCCCACTGAACTCCTCCTATGACTCGCCACGTGACAAGGAGGGGCACGGGTCCCACACCCTCTCCACAGCCGGAGGGAACATGGTGGCACGTGTCAGCGTCTTCGGCCAGGGCTACGGAACGGCCAAGGGAGGCTCACCGAAGGCCCACGTGGCAGCATACAAGGTGTGCTGGCCCCCCGTCGGCGGCGACGAGTGCTTCGACGCTGATATTCTGGCGGCCTTCGACATGGCCATCCATGACGGCGTCGATGTTCTCTCCGTCTCGCCTCGGCTGCCAGCACCATGGATCGGACAGTTTCCCACTTTTGTTGTCCTTGGTAACAATATCACCTTCAAGGGCGAAAGCTTATCAGCTACAAGATTGGCACCCAAGTTCTACCCAATCATTAAAGCTACAGATGCAAAATTGGCGAGTGCAAGAGCTGAAGATGCGGTGCTGTGCCAGAATGGGACCCTGGATCCCAACAAGGTGAAGGGAAAGATCGTGGTATGTCTCCGAGGAATAAATGCAAGAGTGGACAAGGGAGAGCAAGCTTTTCTAGCTGGCGCTGTGGGAATGGTCCTTGCTAATGACAAGGCTAGTGGGAATGAAATTTTAGCTGATCCTCATGTCCTTCCTGCTTCTCATATCAATTTCACTGATGGCACTGCTGTCTATAATTACATCAACTCAACCAAGTTCCCAGTGGCATATATTACACATCCAAAGACTCGATTGGATACTAAGCCAGCCCCGTTTATGGCAGCGTTTTCATCAAAAGGACCAAATACTATCGTGCCAGAGATCCTAAAGCCTGATATCACTGCACCAGGAGTGTCAGTTATAGCAGCCTATACTGAAGCACAAGGACCAACAAATCAACAGTTCGACAAGCGCAGGATTCCGTTTAACTCAGTCTCAGGCACATCAATGTCATGCCCTCACGTTTCAGGCATTGTGGGACTGTTGAGAACCTTGTATCCTACGTGGAGTCCTGCTGCTATTAAATCAGCAATCATGACCACGGCTACAACACTAGACAATGAGGTGGAGCCACTGCTGAATGCTACTGATGGCAAGGCAACACCATTCAGTTACGGGGCAGGACATGTTCAACCAAACAGAGCAATGGATCCCGGGCTAGTTTATGACACAACAATTGACGATTACCTCAACTTCTTATGTGCTTTAGGTTACAACGAGACACAGATCTCAGTGTTCACAGAAGGACCATATCAATGTCGCAAGAAATTTAGTCTCCTCAACCTGAACTATCCCTCAATCACAGTCCCAAAACTCTCTGGGTCAGTGACAGTTACAAGGAGATTGAAAAATGTTGGTTCTCCAGGGACGTACATTGCTCACGTTCAAAACCCACATGGAATCACCGTTTCTGTGAAGCCAAACATCTTGAAGTTCAAAAATATTGGTGAAGAAAAGAGCTTTAAAGTAACCTTCAAGGCCGTGCAAGGGAAGGCCACAAATATCTACGTGTTTGGAAAACTGATATGGTCAGATAGCAAGCATTATGTCTCGAGTCCAATAGTTGTGAAGGCCCTCTCAACTAGAAATTGA | 2055 | 0.4798 | MSPSSSTIHFLLQILLVCLLHRPSFAVKKPRTPIFYSYTRHINGFAATLEEEVAAEIAKHPKVLSVFENRGRKPHTTRSWDFMGLEHNGVIQSNSIWKKARFGEGVVIGNLDTGVWPESKSFSEEGLGPIPSKWRGICDNGNDHTFHCNRKLIGARYFNKGYASVAGPLNSSYDSPRDKEGHGSHTLSTAGGNMVARVSVFGQGYGTAKGGSPKAHVAAYKVCWPPVGGDECFDADILAAFDMAIHDGVDVLSVSPRLPAPWIGQFPTFVVLGNNITFKGESLSATRLAPKFYPIIKATDAKLASARAEDAVLCQNGTLDPNKVKGKIVVCLRGINARVDKGEQAFLAGAVGMVLANDKASGNEILADPHVLPASHINFTDGTAVYNYINSTKFPVAYITHPKTRLDTKPAPFMAAFSSKGPNTIVPEILKPDITAPGVSVIAAYTEAQGPTNQQFDKRRIPFNSVSGTSMSCPHVSGIVGLLRTLYPTWSPAAIKSAIMTTATTLDNEVEPLLNATDGKATPFSYGAGHVQPNRAMDPGLVYDTTIDDYLNFLCALGYNETQISVFTEGPYQCRKKFSLLNLNYPSITVPKLSGSVTVTRRLKNVGSPGTYIAHVQNPHGITVSVKPNILKFKNIGEEKSFKVTFKAVQGKATNIYVFGKLIWSDSKHYVSSPIVVKALSTRN | 684 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo6g01157 | 684 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 4 | 75 | IPR037045 | - | |
| Pumo6g01157 | 684 | FunFam | subtilisin-like protease SBT1.5 | 264 | 406 | - | - | |
| Pumo6g01157 | 684 | Pfam | PA domain | 314 | 384 | IPR003137 | - | |
| Pumo6g01157 | 684 | Gene3D | Peptidase S8/S53 domain | 105 | 255 | IPR036852 | GO:0004252|GO:0006508 | |
| Pumo6g01157 | 684 | Gene3D | Peptidase S8/S53 domain | 407 | 550 | IPR036852 | GO:0004252|GO:0006508 | |
| Pumo6g01157 | 684 | FunFam | Subtilisin-like protease SBT1.5 | 554 | 680 | - | - | |
| Pumo6g01157 | 684 | SUPERFAMILY | Subtilisin-like | 75 | 541 | IPR036852 | GO:0004252|GO:0006508 | |
| Pumo6g01157 | 684 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 79 | 537 | - | - | |
| Pumo6g01157 | 684 | Pfam | Fibronectin type-III domain | 582 | 677 | IPR041469 | - | |
| Pumo6g01157 | 684 | CDD | Peptidases_S8_3 | 73 | 504 | IPR034197 | - | |
| Pumo6g01157 | 684 | Pfam | Peptidase inhibitor I9 | 29 | 73 | IPR010259 | - | |
| Pumo6g01157 | 684 | Gene3D | - | 554 | 680 | - | - | |
| Pumo6g01157 | 684 | Gene3D | - | 265 | 406 | - | - | |
| Pumo6g01157 | 684 | PRINTS | Subtilisin serine protease family (S8) signature | 103 | 122 | IPR015500 | - | |
| Pumo6g01157 | 684 | PRINTS | Subtilisin serine protease family (S8) signature | 178 | 191 | IPR015500 | - | |
| Pumo6g01157 | 684 | PRINTS | Subtilisin serine protease family (S8) signature | 467 | 483 | IPR015500 | - | |
| Pumo6g01157 | 684 | SUPERFAMILY | PA domain | 310 | 395 | IPR046450 | - | |
| Pumo6g01157 | 684 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 265 | 677 | IPR045051 | - | |
| Pumo6g01157 | 684 | Pfam | Subtilase family | 103 | 510 | IPR000209 | GO:0006508|GO:0008236 | |
| Pumo6g01157 | 684 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 468 | 478 | IPR023828 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pumo6g01157 | Pumo-Chr6 | 15326994 | 15335316 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pumo6g01157 | 34 | 678 | Subtilisin-like Serine Gene Family | AT2G04160 | 60.545 | 0.0 | 843 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo6g01157 | - | - | gmx:100794807 | 1243.02 |