Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01154 ATGTTGCCGGCGGAGGCCACCCAATACCACCACACATTGCCCCACCACGTGAACCAGATTGAGTCGGCTCCGGCACCGGTCGAGTTGCCCAGTCACCCAGTTGAGGCGTTGGTGCATAACGGTGGTGGTTCTTCGGTTCGGCGCAAGAGAGGGAGAGGGAAGGCATGGACTAAAGAAGAACACAGGTCATTTCTTCACGGGCTTAGAATATATGGCAAGGGAGATTGGAAAAGCATTTCAAGATATGCTGTTCTAACAAAAACGTTCAACTCAAACACAAATGTAGTTCCTCACCACATTGAGCCACAGAATTCAACTCCTCATCCAGATCCTGCAATTCAACAAGTTCATGAAATGCAACAAATGTTGCCGCTGAATCCACCAAACAGCATGACTCATTTGATAACAACTTTGGACGAGAAAGCTTGCTAG 432 0.4815 MLPAEATQYHHTLPHHVNQIESAPAPVELPSHPVEALVHNGGGSSVRRKRGRGKAWTKEEHRSFLHGLRIYGKGDWKSISRYAVLTKTFNSNTNVVPHHIEPQNSTPHPDPAIQQVHEMQQMLPLNPPNSMTHLITTLDEKAC 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01154 143 CDD SANT 55 88 IPR001005 -
Pumo6g01154 143 SUPERFAMILY Homeodomain-like 56 89 IPR009057 -
Pumo6g01154 143 PANTHER TRANSCRIPTION FACTOR KUA1 12 88 - -
Pumo6g01154 143 Pfam Myb-like DNA-binding domain 54 88 IPR001005 -
Pumo6g01154 143 ProSiteProfiles Myb-like domain profile. 48 88 IPR001005 -
Pumo6g01154 143 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 48 88 IPR017930 -
Pumo6g01154 143 Gene3D - 54 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01154 Pumo-Chr6 15265895 15267073 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo6g01154 Myb_DNA-binding 6.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01154 - - mof:131155531 76.6405