Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01098 ATGGCTTCTCCTGGTGGAACCTATTCATCTGGTTCCAGTTCTCTTCAAAACTCTGGTTCTGAGGGAGACAGAGACATGATGGAACAGAGGAAGAGGAAGAGAATGTTGTCCAATAGGGAATCGGCACGCAGATCGAGGATGAGGAAACAGCAGCACCTGGAAGGTCTCAGTGCCCAAATGGAGCAGCTGAAAAAGGAGAACACCCAAATCAACACAAACATAGGCATCACCACGCAGTTGTTGCACAACGTGGAAGCTGAGAACGCGATTCTGAGGGCCCAAATGGCAGAACTGAGCAACAGATTGAACTCTCTGAACGAAATCATCGGTTTCATTAACTCCACGAATCAATACTTGCTGTTTGATGAGGCACAGGAGACTCAGTTGTTCAATGATTGTGGCTTCATGGATGCTTGGAACGGAATACCACTCAATCAACCAATCATGGCTTCCGCTGACAATGACATGTTGATGTATTAA 480 0.4646 MASPGGTYSSGSSSLQNSGSEGDRDMMEQRKRKRMLSNRESARRSRMRKQQHLEGLSAQMEQLKKENTQINTNIGITTQLLHNVEAENAILRAQMAELSNRLNSLNEIIGFINSTNQYLLFDEAQETQLFNDCGFMDAWNGIPLNQPIMASADNDMLMY 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01098 159 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Pumo6g01098 159 FunFam BZIP transcription factor 28 79 - -
Pumo6g01098 159 Gene3D - 28 82 - -
Pumo6g01098 159 MobiDBLite consensus disorder prediction 1 22 - -
Pumo6g01098 159 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Pumo6g01098 159 CDD bZIP_plant_GBF1 31 82 IPR045314 GO:0003700|GO:0006355
Pumo6g01098 159 MobiDBLite consensus disorder prediction 1 53 - -
Pumo6g01098 159 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 155 - -
Pumo6g01098 159 Coils Coil 46 73 - -
Pumo6g01098 159 Pfam bZIP transcription factor 29 74 IPR004827 GO:0003700|GO:0006355
Pumo6g01098 159 SUPERFAMILY Leucine zipper domain 30 83 IPR046347 GO:0003700|GO:0006355
Pumo6g01098 159 Coils Coil 81 108 - -
Pumo6g01098 159 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Pumo6g01098 159 MobiDBLite consensus disorder prediction 23 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01098 Pumo-Chr6 14531103 14532377 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01098 26 159 bZIP Transcription Factor Family AT4G34590 53.237 4.80e-37 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo6g01098 bZIP_1 6.3e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01098 K25786 - gmx:778139 229.565