Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01089 ATGGCCTCCACCAAGGAACGCGAAAACTTCGTCTACATCGCCAAGCTCGCCGAACAAGCCGAACGCTATGAAGAAATGGTGGATGCAATGAAGAATGTGGCGAAGCTAAACGTGGAATTGACGGTTGAGGAGCGGAACCTTCTGTCGGTTGGGTACAAGAACGTGGTGGGTGCTCGTAGGGCTTCGTGGAGGATTCTCTCGTCGATTGAGCAGAAAGAAGAGGCTAAAGGGAACGATGTGAGTGTGAAGCGGATAAAGGAGTATAGGCAGAAGGTGGAGACTGAGTTGTCCAATATCTGCAGTGATATCATGACTGTTATTGATGAACACCTTATTCCCTCTAGCTCTGCTGGTGAACCTAGTGTCTTTTTCTACAAAATGAAGGGGGACTATTACCGGTATCTCTCGGAGTTCAAGTCTGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAGGCGTATCAGGCGGCTTCCACTACTGCAGAGGCTGAGTTACCACCCACACATCCCATCCGTTTGGGCCTGGCTTTGAACTTCTCCGTCTTTTATTATGAAATTTTGAACTCTCCTGAAAGGGCCTGTCACCTTGCTAAGCAGGCATTTGATGAAGCAATCTCTGAGTTGGATACTCTGAGTGAGGAGTCTTACAAAGACAGCACCCTAATTATGCAGCTTCTGAGGGATAACCTCACCTTGTGGACTTCTGACATCCCTGAAGATGGAGGTATTCATTAG 738 0.4783 MASTKERENFVYIAKLAEQAERYEEMVDAMKNVAKLNVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNDVSVKRIKEYRQKVETELSNICSDIMTVIDEHLIPSSSAGEPSVFFYKMKGDYYRYLSEFKSGDERKEAADHSMKAYQAASTTAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGIH 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01089 245 SMART 1433_4 7 243 IPR023410 -
Pumo6g01089 245 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Pumo6g01089 245 PIRSF 14-3-3 1 244 IPR000308 -
Pumo6g01089 245 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Pumo6g01089 245 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Pumo6g01089 245 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Pumo6g01089 245 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Pumo6g01089 245 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Pumo6g01089 245 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Pumo6g01089 245 Coils Coil 13 33 - -
Pumo6g01089 245 PANTHER 14-3-3 PROTEIN 7 238 IPR000308 -
Pumo6g01089 245 FunFam 14-3-3 protein epsilon 2 245 - -
Pumo6g01089 245 Pfam 14-3-3 protein 14 235 IPR023410 -
Pumo6g01089 245 Gene3D - 1 243 IPR036815 -
Pumo6g01089 245 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Pumo6g01089 245 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01089 Pumo-Chr6 14471996 14478811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01089 1 243 14-3-3 family AT2G42590 83.128 9.16e-155 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01089 K06630 - gmx:100807980 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01089 6 14471996 14478811 Pumo6g01089 6 14471996 14478811 ECH